Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01650 ATGTTATTTGAATACCTTGCATGTTGCAATTGGAATGAAATCTGTACTGGTGTGGTTGTGGCAGTGTATGTTGTGGAAGAAGTACTTGTATCTTCTAATGAAAAGGAAGCCAATGAAGAAAATGATAAATGTGATGATAGTTTAGAAGCAAATATTGtttatgaagatgaagaacCTCAAGTTGGAATGATATTTAGCTCTAAAGATGAACTTACAGAACATTACAAGAGTTATGCTCGGTCTATAGGTTTTGGTGTTAGTAAACTTAATAGCAAAAATGGAGAtgatggaaaaaaatattttactctaGCATGTAGTCGTGGAACAAAGTATGTGAGTAAATCAAATAATCTTTTGAAACCAAATCCTATAACAAAAACTCAGTGTAAGGCTAGATTAAATGCATGTATTTCTTTAGATGGAACAGTTGCTATTTCAAGAATTGTTCTTGAACATAATCATGACCTAAGCCCTACCAAAGCACGCTATTTTAAAAGTAATAAGAATTTGGAGCCTCATATAAAAAGGAGGTTAGAACTCAATGATCGGGCTGGAATAAGAGTAAGTAGAAACTATCGATCTTTGGTTGTTGAAGCAAATGGATATGAGAATTTGACATTTGGTGAAAAGGATTGTCGAAACTATATAGATAAAATAAGGAGACTACGACTTGGCACAGGAGATGCTGATGCGATTCAGAACTATTTTGTTAGaatgcaaaaacaaaacaaccaaTTCTATTATTTAATAGACATTGACGATGATAGTCGTTTACGTAATGTGTTTTGGGCAGATGCGAGAAGTAGGGCTGCATATGAATACTTTGGTGAAGTTGTAACATTTGATACTACTTACCTAACTAATAAATATCACATGCCTTTTGCCCCGTTTGTTGGAGTAAACCATCACGGCCAATCTATGTTGTTGGGTTGTGCTTTATTGTCAAATGAGGATACTGAGACTTTTACTTGGTTGTTCTCAACATGGTTAGAATGTATGCATGGACGTTCTCCAAATGCCATTATTACTGATCAAGATAGAGCCATGAAAAATGCAATTGAGATTGTTTTTCCAAATGCTCGTCATCGATGGTGTCTATGGCATTTAATGAAAAAGGTTCCAGAAAAGTTAGCTAGACACTCTAATTATGAGTCTATCAAAGCACTTTTGCATGATGCTGTATATGATTCTTTGAGTAAAAGTGATTTCATGGAAAAGTGGGAAAAACTAATTGAAGATTTTGAACTTCAGGATAACGAATGGTTGAAGGGGATATTTCATGAAAGAAATCGTTGGGTTCCTGTGTACGTTAAAGACACATTTTGGGCGGGAATGTCAACAACACAAAGAAGTGAAAGTATGAACTCATTTTTTGATGGTTATGTAAATTCAAAGACATCATTGAAGCAATTTGTTGAACAATATGACAATGCATTgagagataaaattgaaaaggaaaacaaaGCTGATTTTGATTCATTTAACAAAGTGATAGCTTGTTTAAGTCATTTTGGCTTTGAGTCTCAATTCCAAAAAGCATTCACCAAtgcaaaattcaaagaatttcaAGCGGAGTGGAGGAAGGATATAAGGCGAAGACATACCCATATTAAATGTGGTTTTGATCATTTTGTTGGAAATGTTGAATTGCAAAGAGTTGATAAAGCTTGTGCTGCCTTTTATGAAGTGGCTTCTAGGGTGATAAATACTGatcatgattttttaaaaatgatgaattGGATCAAGGATATAAAAGATGAGTTTACCTCTAAAGAAACATCCCCGACCATTGTAGAAGAAGATGGTTCAAATCAAACTCAAGTGACTAAAATTCTTGACCCTGTAAAGACTCGAAGTAAAGGACGTCCTCCTTCGCAAAGGAAGTCTTCTAAAGTTGATCAGATTGTGAAGAAACTCGCAAAAAAGAAGACCCAAAAAATTAGCAAAAAAAGTGAAAATCGTCATGCTCAAAAAGAgGACATGTGTGCATCTCAAGTACAAGAGAGTGTTCAAGTAATTGATAGAGTTGGCACACAAGAGAGCATTCAAgGTGAACAAATTAGTTTCGGTAGGAATGAACAAGGTGGTGTAAATAAATTAGCTCCCTTCAATCCAAACTCAATACTTATATCTGAAGTTCCATTTTATTATCAAGTCATGAATCATGGTGGCTCTTACTTTGAATTGTTGCAGGCTCAACACAATGTCAATGATCCGTCATCATCAAATAATCATGCAGACATGAAAAAATCGATCAAGCAAGTTAAAAGAAGTTATGGCGAACAGCGGCAAAGAAAGGGAAAGGAACATAGTGACAAAGCATCGACGACAAAGGAACGGACGACGACGACGACGGCGGCAATTGAGATGATAGAACAACATCTAGATGATGGGTATCAATTCCTTGAAAATTGCTTATTGAAACTCTTTGAGATCCGACGGTTGTTACTTCATCTGCTTCTCCGGGAGTTATTGGAGAGCAAAACTAGCCGGTCTTCATAG 2502 0.3413 MLFEYLACCNWNEICTGVVVAVYVVEEVLVSSNEKEANEENDKCDDSLEANIVYEDEEPQVGMIFSSKDELTEHYKSYARSIGFGVSKLNSKNGDDGKKYFTLACSRGTKYVSKSNNLLKPNPITKTQCKARLNACISLDGTVAISRIVLEHNHDLSPTKARYFKSNKNLEPHIKRRLELNDRAGIRVSRNYRSLVVEANGYENLTFGEKDCRNYIDKIRRLRLGTGDADAIQNYFVRMQKQNNQFYYLIDIDDDSRLRNVFWADARSRAAYEYFGEVVTFDTTYLTNKYHMPFAPFVGVNHHGQSMLLGCALLSNEDTETFTWLFSTWLECMHGRSPNAIITDQDRAMKNAIEIVFPNARHRWCLWHLMKKVPEKLARHSNYESIKALLHDAVYDSLSKSDFMEKWEKLIEDFELQDNEWLKGIFHERNRWVPVYVKDTFWAGMSTTQRSESMNSFFDGYVNSKTSLKQFVEQYDNALRDKIEKENKADFDSFNKVIACLSHFGFESQFQKAFTNAKFKEFQAEWRKDIRRRHTHIKCGFDHFVGNVELQRVDKACAAFYEVASRVINTDHDFLKMMNWIKDIKDEFTSKETSPTIVEEDGSNQTQVTKILDPVKTRSKGRPPSQRKSSKVDQIVKKLAKKKTQKISKKSENRHAQKEDMCASQVQESVQVIDRVGTQESIQGEQISFGRNEQGGVNKLAPFNPNSILISEVPFYYQVMNHGGSYFELLQAQHNVNDPSSSNNHADMKKSIKQVKRSYGEQRQRKGKEHSDKASTTKERTTTTTAAIEMIEQHLDDGYQFLENCLLKLFEIRRLLLHLLLRELLESKTSRSS 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01650 833 MobiDBLite consensus disorder prediction 613 634 - -
Tsu06g01650 833 Pfam MULE transposase domain 278 372 IPR018289 -
Tsu06g01650 833 Pfam FAR1 DNA-binding domain 74 157 IPR004330 -
Tsu06g01650 833 Coils Coil 468 488 - -
Tsu06g01650 833 PANTHER OS03G0843700 PROTEIN 32 528 - -
Tsu06g01650 833 MobiDBLite consensus disorder prediction 643 662 - -
Tsu06g01650 833 MobiDBLite consensus disorder prediction 755 777 - -
Tsu06g01650 833 MobiDBLite consensus disorder prediction 755 782 - -
Tsu06g01650 833 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 528 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01650 Tsu-Chr6 18019526 18026272 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g01650 MULE 5.1e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01650 - - cam:101506732 761.525