Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01618 ATGCAACGAATTCATCCACAAATTCCTTCATCTGTTGATTCGTTTGATGAATGGATTTATTCCTTGTTCCCATATTTCCACACCTGGAAACAACGCTATgGTACGATGTATTTATACTCTACCGGACTGAAACAACATCTATTTGTTGGGAAGCCAGAATTAATAAAAGACATAAACATGTCCCTACATCTAGGTAGGCCTTCGTATCTAACTAAACCATTGTTGCCAATGCTTGGAAATGGTATCCTCAGAGCTCATGGACAACTATGGACCTTCCAAAGGAATCTTGTTGCTCCAGAGTTCTTCATTACCAAAATTAAGAACATGATAGATATTATGGAAGATTCTACCCTGACTATTATCAAAAAGTGGGAGAGATATATAacagaaaataaagaaaagattgCAGAGATAGTGATTGAAACTGATCTAAAGGTTCTTACAGAGGATGTTATTTCCAAAACTTGTTTTGGCAGCGATTATGCACAAGGAAAGCAAATATTTGCAAAATTGGCTGCCATGCAATCTAAACTTTCAGCGACTAGCATTCTTTTCGGATTTCTAAATCTAAGTTTTCTTCCCactaaagaaaacaaagagatGTGGAGGTTGAAGAAAGAGGTGGACATGTTGGTAATGAATATCATTCATGATCGTGaagtacaaaacaaaaacaaaaatattaatgagaAACAAACTGATCTATTACAAAAGATATTAGAAGGTGTTGCAAGTGACACAACTTTAAATGCCAGTGAACATAACATGAATCAATTGATTGTAGACCTCTGCAAAAATATCTACTTCGCCGGCTCTGAGACAACCGCTCTTGCCGTTACGTGGACATTGTTGCTCCTTGCAGTACATCCAGAATGGCAACAGCGGGTTCGATCTGAGATTTATGATACTTTCGATAACAATTCGCCTCATTCTTTTCATGACATGAGCAAACTTCAAAATTTGAAAGTGCTAACAATGGTAATTCAAGAGAGTCTTCGTCTCTATGGGCCTGCAGTCATGACCCCAAGGGAAGTATTAGCTGAGATGAAGTTGGGAGAATTTGTTATCCCTAAAGGCATCTACATGTGGTTGTTCTTGACATTGTTGCATCGCGACACCGATAATTGTGGACCAGATGCTACAAAATTCAAGCCAGAAAGATTTGCAAATGGTGTTTCTGCAGCTTGTAAGTATCCTCAAGCCTATATACCATTTGGACTCGGGAGTCGAATTTGCCCCGGACAAAACTTTGCCATTGTAGAAATGAAGGTGGTTCTCAGTCTTCTTCTGTATAATTTCTCCTTTAATGTTTCGCCAAATTATCGCCATTGTCCTGTGTATAATATGTTGTTAATGCCAAAATATGGTGTAAGGCTTCTTGTTAGCAAGTGGGCCGATTCTGTTGAACTTCCTGTACTTGGGTATTTTGCTGATTTTGCATTTGCTGACGCTAGAACTGCTAAAACAGCTGAAATTGTTGAAGCTGGTCTGACTGGTTTGGTAATTGTTGAAACTGTTGCTGACGCTGAAAGTCTTCCCTCATATTTGCCAATGCCTCTTGGTGTTCAGCTCTTAGTCGTTGTTCCATTTCTGCAATACTTTCCCCACTTGCAGATTGACCAGAACTGA 1629 0.3769 MQRIHPQIPSSVDSFDEWIYSLFPYFHTWKQRYGTMYLYSTGLKQHLFVGKPELIKDINMSLHLGRPSYLTKPLLPMLGNGILRAHGQLWTFQRNLVAPEFFITKIKNMIDIMEDSTLTIIKKWERYITENKEKIAEIVIETDLKVLTEDVISKTCFGSDYAQGKQIFAKLAAMQSKLSATSILFGFLNLSFLPTKENKEMWRLKKEVDMLVMNIIHDREVQNKNKNINEKQTDLLQKILEGVASDTTLNASEHNMNQLIVDLCKNIYFAGSETTALAVTWTLLLLAVHPEWQQRVRSEIYDTFDNNSPHSFHDMSKLQNLKVLTMVIQESLRLYGPAVMTPREVLAEMKLGEFVIPKGIYMWLFLTLLHRDTDNCGPDATKFKPERFANGVSAACKYPQAYIPFGLGSRICPGQNFAIVEMKVVLSLLLYNFSFNVSPNYRHCPVYNMLLMPKYGVRLLVSKWADSVELPVLGYFADFAFADARTAKTAEIVEAGLTGLVIVETVADAESLPSYLPMPLGVQLLVVVPFLQYFPHLQIDQN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01618 542 SUPERFAMILY Cytochrome P450 19 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 Pfam Cytochrome P450 24 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS E-class P450 group I signature 30 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 459 - -
Tsu06g01618 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Tsu06g01618 542 Gene3D Cytochrome P450 8 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01618 542 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01618 Tsu-Chr6 17456892 17465321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01618 61 461 Cytochrome P450 AT5G24900 41.133 2.55e-115 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01618 - - gmx:100801472 619.002