Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01613 ATGTATAACTTCCAACAATATCGCCATATTCAAGAGTCAGGATGGACGATCGGGTGGACATGGGTGAAGGAGGAAGTAATTTGGTACTTGTTAGGAAGCCATGCAATAGAGCAAGGAGATTGTTCAAAATTCCATTCAGGGATTCCACACAGTTGTAAGAAAAAACCAACAGTGGTGGATAAGTTGTCAAGAATACCTTACAACCTCAAGGTTGCCAACTACTGCAAAGCTGGAGTCTTGAGTTCATTAGCTCAAGATCCAAGCAATGTAGTAAGTATGTTCGAGATTACTGTTGGTTCTACAGGAACAACTTGTAAGTCTATTCAACTTCCAAAAAACTTCACCCTCAAAACACCTGGTCCTGGTTATACTTGTGGTCCTGCAAAGATTGTTAGAACAACTCCGTATGTTACCAGTGATAAGAGAATAGTCTCACAAACTTTCAGCTATGGTTACCATGTACAACTTCCAGCAATATCGCCATATTCAAGAGTCAGGATGGACGATCGGGTGGACATGGGCGAAGGAGAAATGGTGGATAAGTTGTCAAGAATACCTTACAACCTCAAGGTTGCCAACTGCTGCAAAGTTGGAGTCTTGAGTTCATTAGCTCAAGATCCAAGCAATGCAGTAAGTATGTTCGAGATTACTGTTGGTTCTACAGGAACAACTTGTAAGTCTATTCAACTTCCAAAAAACTTCACCCTCAAAACACCTGGTCCTGGTTATACATGTGGTCCTGCAAAGATTGTTAGAACAACTCCGTATGTTACCAGTGATAAGAGAATAGTCTCACAAGCTTTCAGTAAGTTTTGA 816 0.4093 MYNFQQYRHIQESGWTIGWTWVKEEVIWYLLGSHAIEQGDCSKFHSGIPHSCKKKPTVVDKLSRIPYNLKVANYCKAGVLSSLAQDPSNVVSMFEITVGSTGTTCKSIQLPKNFTLKTPGPGYTCGPAKIVRTTPYVTSDKRIVSQTFSYGYHVQLPAISPYSRVRMDDRVDMGEGEMVDKLSRIPYNLKVANCCKVGVLSSLAQDPSNAVSMFEITVGSTGTTCKSIQLPKNFTLKTPGPGYTCGPAKIVRTTPYVTSDKRIVSQAFSKF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01613 271 PANTHER PROTEIN COBRA 1 148 IPR006918 GO:0010215|GO:0031225
Tsu06g01613 271 PANTHER COBRA-LIKE PROTEIN 1 148 - -
Tsu06g01613 271 PANTHER COBRA-LIKE PROTEIN 178 268 - -
Tsu06g01613 271 PANTHER PROTEIN COBRA 178 268 IPR006918 GO:0010215|GO:0031225
Tsu06g01613 271 Pfam COBRA-like protein 1 148 IPR006918 GO:0010215|GO:0031225
Tsu06g01613 271 Pfam COBRA-like protein 177 270 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01613 Tsu-Chr6 17366396 17368055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01613 178 268 COBRA Gene Family AT5G60920 58.242 2.61e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01613 - - lja:Lj1g3v0569370.1 224.557