Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01609 ATGGACATTGATAAGGTTAGTTTTACCGGTTCGATCGAAGTAAGACGTGAAATAATGATATCGGCAGCAAGAAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGAAAATCACCCATCTTAATATTCGACGATGCTGATGTTGATAAAGCTGATGAGCTTGCTCTCTTAGGCATCCTATTTAATAagGGAGAAATTTGTGTTGCAGGTTCACGTGTGTTTGTTCAAGAAGGAATCTATGACGAATTTGAGAAGTTGGTGGAGAAAGCAAAAGCTTGGATTGTTGGTGATCCTTTTGATCCTAAAGTTCAGCAAGGACCTCAAGTTGATAAGAAGCAATTTGAGAAAATTCTTTCCTATATTGAGCATGGAAAGAAAGATGGAGCAACCCTTTTGACAGGTGGTAAAAGAGTTGGAAACAAGGGTTACTACTTAGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTCATATCACTTATGAAGTTCAAGCTTGGGACCTTGGAGTGTACTCCTCTTGGTGTTGAATATGAATTTAGTAACATGGCACAGTTATATTTTCCTGTATGTTATAACGTTCCCTTTCAACTTCCTAATTTAATTGCTGCCACTAGTGaATTAAAAAGGTCTGAGAACATCCCTGTGGAAATATGGAGAGGATTGATTATACCCTGGATTTTAGGAAGGAATCCAGGTTATGAGTTAAGTGATTTATGA 750 0.372 MDIDKVSFTGSIEVRREIMISAARSNLKPVSLELGGKSPILIFDDADVDKADELALLGILFNKGEICVAGSRVFVQEGIYDEFEKLVEKAKAWIVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKDGATLLTGGKRVGNKGYYLEPTIFSNVKEDMLIVQDEIFGPVISLMKFKLGTLECTPLGVEYEFSNMAQLYFPVCYNVPFQLPNLIAATSELKRSENIPVEIWRGLIIPWILGRNPGYELSDL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01609 249 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 32 39 IPR029510 GO:0016491
Tsu06g01609 249 Pfam Aldehyde dehydrogenase family 2 175 IPR015590 GO:0016491
Tsu06g01609 249 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 37 IPR016162 GO:0016491
Tsu06g01609 249 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 1 175 - -
Tsu06g01609 249 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 175 - -
Tsu06g01609 249 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 60 71 IPR016160 GO:0016491
Tsu06g01609 249 SUPERFAMILY ALDH-like 2 175 IPR016161 GO:0016491
Tsu06g01609 249 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 38 175 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01609 Tsu-Chr6 17227911 17234936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01609 1 175 Aldehyde Dehydrogenase Gene Family AT3G24503 76.136 6.00e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01609 K12355 - gmx:100791396 316.62