Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01591 ATGTTATGTTACCTGCTAGAGCTTTTCAGATATAAAGAATCTTTGATCAACCCTAAGGATCCTAACAATGGATTTCAAGCATCTCATCCACCTCTGCCTGATTTAAAAGAATCTGGCCTTTCTGAAAATCATCCATCTAAATTAAAAGTAGCTGCCGGAGTTCCATCCATGCAAAAGAAACTAGCTGTTACAATCAGGTCAACAACAAGTGCTTCaacagatgatgaagaagcccATGGAGAGAttaatatgaacaaaaacatgGACTCTTCTGATGCGAAAAGAGTTAGGAGGATGCTATCTAATAGGGAGTCTGCTAGACGCTCgagaaaaagaaagcaagatGAATTAACTGAGCATGAAACACGGGTTTCTAAATTAAGAGATGAAAATTCTTCGTTGTTAAAGAGTTTAACAGATATGACCCAAAAATACAATGATTCTCATGCTGAAAACCGAGTATTAAAAGCTAAAGTTGAAACATTAAAAGCACAGgttaattttcataaaagcaTGCTGGTTGGAGTTAACATTCCTGAATCCTGGTTAGGTGAAGCTGCGTCTGCTCTGTGTTGTAAAGTGGGAAAGATTCCTTTCTTGTATCTGGGCCTTTCTATTGGGGGTGATCCGCGGCGTCTGAGTTTTTGGGAACCGGTGTTGGCTCGTTTGAAGAATAGATTGTCTGGGTGGAAGAGTCGTTTCCTCTCTTTTGGTGGCCGTCTGGCCCGGTCTTCAGATAGGTGGCAGTGGCAGCTTGACCCGGATGAAGGCTACACTGTCCAGGGAGCATATCAGCTTTTGACTTCTCAGGTTTCAGCTACTATGGATGATGCAGACAAACTTATTTGGCATTCTCAGGTCCCGTTGAAGGTTTCCATCTTGGCGTGGCGTTTACTGCGTGACAGATTACCCACAAAAATAAATCTGGTTACTCGAGGCATTTTATCTTCCGCAGATCACTTTTGCGTTTCTGGGTGTGGGGAGGTAGAGTCGGCACTTCATCTATTCATCTCTTGCAGTACTTTTGGATCCCTTTGGACGTTAGTGTGTTCGTGGATAGACATCATTCCGGTGCAGTCCACTTCTATTCGTGATCATTTTGTTCAGTTCACTTGTGCAGCAGGTGGGTCCCGGCAGCGGCGTTCCTTTATGCAGCTTATTTGGCTGGCTGCCCTCTCTCGGCTGGATGTTGGTCCAGCCTACTACGAGGATCCCGTATCCAGCAACCCCACCGCCATTATCGCTGCCGTTTTCGAATCCTGCCGTGGAACTGCAAAGCACCGCTGCATCTGTCCGTCGGTCTCTCTCCCTCGCGGCCAATCTATCCCTCTCGGTCAAGATCTCTCTCTCGATGCATCAACCGATGACTCAGAAGGGATTCCATCAAATAATGACATTTCCATTCCCATTGAAGACATCTCAGACATTGCATTATACCTTGGATTCGTTGATGAACACAAGTAA 1464 0.4317 MLCYLLELFRYKESLINPKDPNNGFQASHPPLPDLKESGLSENHPSKLKVAAGVPSMQKKLAVTIRSTTSASTDDEEAHGEINMNKNMDSSDAKRVRRMLSNRESARRSRKRKQDELTEHETRVSKLRDENSSLLKSLTDMTQKYNDSHAENRVLKAKVETLKAQVNFHKSMLVGVNIPESWLGEAASALCCKVGKIPFLYLGLSIGGDPRRLSFWEPVLARLKNRLSGWKSRFLSFGGRLARSSDRWQWQLDPDEGYTVQGAYQLLTSQVSATMDDADKLIWHSQVPLKVSILAWRLLRDRLPTKINLVTRGILSSADHFCVSGCGEVESALHLFISCSTFGSLWTLVCSWIDIIPVQSTSIRDHFVQFTCAAGGSRQRRSFMQLIWLAALSRLDVGPAYYEDPVSSNPTAIIAAVFESCRGTAKHRCICPSVSLPRGQSIPLGQDLSLDASTDDSEGIPSNNDISIPIEDISDIALYLGFVDEHK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01591 487 MobiDBLite consensus disorder prediction 72 125 - -
Tsu06g01591 487 MobiDBLite consensus disorder prediction 17 41 - -
Tsu06g01591 487 Gene3D - 93 147 - -
Tsu06g01591 487 MobiDBLite consensus disorder prediction 66 125 - -
Tsu06g01591 487 SUPERFAMILY Leucine zipper domain 94 145 IPR046347 GO:0003700|GO:0006355
Tsu06g01591 487 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 97 112 IPR004827 GO:0003700|GO:0006355
Tsu06g01591 487 CDD bZIP_plant_GBF1 95 146 IPR045314 GO:0003700|GO:0006355
Tsu06g01591 487 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Tsu06g01591 487 Pfam bZIP transcription factor 93 146 IPR004827 GO:0003700|GO:0006355
Tsu06g01591 487 Coils Coil 103 137 - -
Tsu06g01591 487 PANTHER BASIC LEUCINE ZIPPER 63 34 173 - -
Tsu06g01591 487 Pfam zinc-binding in reverse transcriptase 258 346 IPR026960 -
Tsu06g01591 487 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01591 Tsu-Chr6 16945159 16954321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01591 37 174 bZIP Transcription Factor Family AT5G24800 38.849 2.66e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu06g01591 zf-RVT 2.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01591 K25784 - lja:Lj1g3v4979980.1 164.081