Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01588 ATGAATCATAGTGATTCAGAATTTCATCCGTATTCACAACAAGCTGCTGAAGATATTGATTTTTTGAAGACCCAACTTGATATTGTCTGCGCTAAGCATCAGGAATCTTTGATCAACCCTAAGGATCCTACCAATGGATTTCAAGCATCTCATCCACCTCTGCCTGATTTAAAAGCTGTCGGAGTTCCATCCATGCAAAAGAAACCTGCTGTTACAATCAGGTCAACAACAAGTGCTTCaacagatgatgaagaagcccAGGGAGAGATTAATATGAACATGGACTCTTCTGATGCGAAAAAAGTTAGGAGGATGCTATCTAATAGGGAGTCTGCTAGACGCTCgagaaaaagaaagcaagatCTATTAACTGAGCTTGAAACACAGGTTTCTAAATTAAGTGATGAAAATTCTTCGTTGTTAAAGAGTTTAACAGATATGACCCAAAAATACAATGATTCTCATGCTGAAAACCGAGTATTAAAAGCTAAAGTTGAAACATTAATAGCACAGGTGAAGTTGGCTGAAGCTAAATGGAGGTTTGTAGGACCTCCTGGGTTGAAACAAGATAGTAAGGACTAA 582 0.3574 MNHSDSEFHPYSQQAAEDIDFLKTQLDIVCAKHQESLINPKDPTNGFQASHPPLPDLKAVGVPSMQKKPAVTIRSTTSASTDDEEAQGEINMNMDSSDAKKVRRMLSNRESARRSRKRKQDLLTELETQVSKLSDENSSLLKSLTDMTQKYNDSHAENRVLKAKVETLIAQVKLAEAKWRFVGPPGLKQDSKD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01588 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 103 118 IPR004827 GO:0003700|GO:0006355
Tsu06g01588 193 Coils Coil 158 178 - -
Tsu06g01588 193 CDD bZIP_plant_GBF1 101 152 IPR045314 GO:0003700|GO:0006355
Tsu06g01588 193 Coils Coil 109 143 - -
Tsu06g01588 193 PANTHER BASIC LEUCINE ZIPPER 63 20 179 - -
Tsu06g01588 193 SUPERFAMILY Leucine zipper domain 100 151 IPR046347 GO:0003700|GO:0006355
Tsu06g01588 193 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
Tsu06g01588 193 MobiDBLite consensus disorder prediction 69 94 - -
Tsu06g01588 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 161 IPR004827 GO:0003700|GO:0006355
Tsu06g01588 193 MobiDBLite consensus disorder prediction 37 121 - -
Tsu06g01588 193 Gene3D - 99 156 - -
Tsu06g01588 193 MobiDBLite consensus disorder prediction 96 121 - -
Tsu06g01588 193 Pfam bZIP transcription factor 99 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01588 Tsu-Chr6 16917652 16920145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01588 43 176 bZIP Transcription Factor Family AT5G24800 44.755 6.47e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu06g01588 bZIP_1 4.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01588 K25784 - lja:Lj1g3v4979980.1 156.762