Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01545 ATGACAAAACAAGCTATGGAAATTTGCAAAGAAGTCCTTGGTTATGCAGTTGATGATGTTCATGAATCAATTAATACAATGGATCAATTTGATCTAAGACAAACCATGTCTAAGGTTCTTAACACATCATTGGAGCTAAGTAACAATGCTTTTGATATAATTAATGGAGTTGCAAACTTTGTGAAAAGCCTTAACTTAAGTTCTTTTACAAGTGAATTGAATAATAGGAAACTTTTGTCTGATGATGATGGTTTCCCAACATGGGCTAGTGAAAATCAAAGGAAACTTCTTGAAACCATTTCTAAACAGTACAACATGCCGGCAGAGAGACAAAGATCTCTTTTGAGTTTTCCCATCAAAGATAAGAACATTAATAGAACAAGATCAGAAACAAGTATGGAAGCAAAAGGTGGAGAAGTTAGAAGGCTTCATATAATCTACTTTCTTAGTCATTTAGGTGGTCATGCAGAACATCCTCATCTTATTCGTGTTCTTCATCTTACTCGAAATGGTGTTTATCTTAGAGATATTAAGAGATGGCTTGGTGAATTGAGAGGAAAAGACTTACCTGAATCCTATGCTTGGTCCTACAAAAGGTTGAGGTACAAGAGTGGATATGTGTGGCAAGATTTAATGGATGATGACCTCATAACCCCCATTTCTGATAATGAATATGTCCTCAAAGGATCACAAATCCACACTATCCCTTTTGAAACTCATTCAATTAATTCTgttaatgaaaagaaaaatgatactGATATACTTGCTGAGAAAGCAAAAGTTGAAGAGGACGAACAAAAGCGGCAAAAGAAACCGTCTTTATCGGAAGAAAAATCGGAAATTCTGAAAGAAACTGATACAAAAAAGAATAATCTAAATCAAGGGTCATCCGAAAGAAGTCAAGATTCATTGGTTTTCAGCTCGGATAGATCATCGGTGACCGATGATGATTCTTGTTCTAAAGTTGAAGAAGAGAAGCTTTTAGGTAATAATGGAAAAGAAGGTTTGATTGAAAAGAATCATGAGAAGTTTGAAGCTTTTTCATTTCCTTCATTGTATCATAACTTGATGAGTAAGAAAGGTAAAAAAGATGGACATAATAACAAAACAGATAGTACACCTCCTGATTCGACGTTTTCTACTCCGACATCATCAACTTCATCACAATCTCAATCTTCTTTTACTAAGATAAGAAGTAATTCTACTAGAGTTACTAGTGTGTTCAGAAATTGGATTGGTTGTGGAACTGTTGCAACAAATGATGCTGCTTTTCTCTCTATGAATCCTGCTCAGAAAATTCTGTCTAAGGAAGCTAACAGTGTGACAGAAAAAAGAGGTGAGATTTGTAAAGGAGATAAATTGGGAGGTTCAGCTAGGTGTTTTGGGACTCCTTGGAATTATCATGATCAAAATGAACATTTTGGAGCAAGAAAAAGCTGTGATGGAGAGGAAATACCCAGGGGAAGGAAAAAGCTAAGTGAGTTAATGAGTCAAACTTCTTATAAGCCATTTGGTGGACCATTTTGCTCGCAATGTGGGAAAACATTCAAGCCAGAGAAAATGCACAAACACATGAAATCTTGTAAAGGAATGAAAAGCATGGGAACTTCAACTATTGCTGAGGAATCATCAACAAAGCTTCAAAGATCAACTTCATCATGTAAAGATTACCTTTTGCAAAATTAA 1686 0.3493 MTKQAMEICKEVLGYAVDDVHESINTMDQFDLRQTMSKVLNTSLELSNNAFDIINGVANFVKSLNLSSFTSELNNRKLLSDDDGFPTWASENQRKLLETISKQYNMPAERQRSLLSFPIKDKNINRTRSETSMEAKGGEVRRLHIIYFLSHLGGHAEHPHLIRVLHLTRNGVYLRDIKRWLGELRGKDLPESYAWSYKRLRYKSGYVWQDLMDDDLITPISDNEYVLKGSQIHTIPFETHSINSVNEKKNDTDILAEKAKVEEDEQKRQKKPSLSEEKSEILKETDTKKNNLNQGSSERSQDSLVFSSDRSSVTDDDSCSKVEEEKLLGNNGKEGLIEKNHEKFEAFSFPSLYHNLMSKKGKKDGHNNKTDSTPPDSTFSTPTSSTSSQSQSSFTKIRSNSTRVTSVFRNWIGCGTVATNDAAFLSMNPAQKILSKEANSVTEKRGEICKGDKLGGSARCFGTPWNYHDQNEHFGARKSCDGEEIPRGRKKLSELMSQTSYKPFGGPFCSQCGKTFKPEKMHKHMKSCKGMKSMGTSTIAEESSTKLQRSTSSCKDYLLQN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01545 561 MobiDBLite consensus disorder prediction 358 399 - -
Tsu06g01545 561 MobiDBLite consensus disorder prediction 258 287 - -
Tsu06g01545 561 MobiDBLite consensus disorder prediction 288 313 - -
Tsu06g01545 561 MobiDBLite consensus disorder prediction 258 326 - -
Tsu06g01545 561 PANTHER F3F20.2 PROTEIN 134 554 - -
Tsu06g01545 561 Pfam Protein SOSEKI, plant 144 410 IPR010369 -
Tsu06g01545 561 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 134 554 IPR010369 -
Tsu06g01545 561 MobiDBLite consensus disorder prediction 371 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01545 Tsu-Chr6 16353652 16362377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01545 2 99 Carbohydrate Esterase AT5G49180 28.889 2.81e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01545 - - aprc:113855595 516.153