Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01537 ATGGCCGAGGCTTTACTTGGAGTTGTGATTGAGAATTTGATGTCTCTGCTTCAAAATGAATTTTCAACCATTTCTGGAATCAGTTCAAAGGCTCAAAAGCTATCAACCAACTTAGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAAGTGACAGACCGCTCTATTAAGGTATGGCTACAACAACTCAAAGATGCTGTATATGTGCTTGATGATATTCTTGATGAGTGTTCCATTGAATTCAGTCGATTTAAGGGCTCATCCTCTTTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAACAGGTTGAAAGAAATTACAAGCAGATTGGATGAAATTGCTGACAGGAAGAACAAGTTTCTTCTACAAGTTGATACTGCTAAGGAAATGCCAGTTGAAGTGGCTGAATGGCGTCAAACCAGTTCAATTATTGCTGAACCCAAAGTTTACGGACGAGAAGATGATAAAGAGAAGATTGTCGAGTTTCTTCTCAACCAAGCGAGGGACTCTAACTCTCTTTCCGTCTATCCTGTTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCACTCAATTGGTCTACAATGATCAAAGGGTGAGTAGCACCAATTTTCATACAAAGATATGGGTTTGTGTTTCTGAAGCTTTCTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCAAAAGTGAGAAGTGTGATGCCTTGGATTTAGATGTAATACAGAGAAAGGTGCAAGAACTATTGCAAGGTAAAAGATTTTTGCTTGTTTTAGACGACGTTTGGAACAAAAATGAAGAACTGAAATTCGGATTAAGCCAAGAGAAATGGAACCAGTTGAAATCAGTGTTGTCCGGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAAGTTGTTGCATCAATAATGGGAACATGTCAAGCTCATCATTTGTCTGGTCTCTCTGATAAGGAATGTTGGTTGTTATTCAAACAATATGCATTTGGAATTGACAGAGAAGAACAAGTAGAACTTGTGGAAATTGGCAAGGATATAGCAAAAAAGTGCAGAGGATTGCCTCTTGCTGCACAAGCATTGGGAGGTCTGATGCACTCAAGGAGTGGAGAAAAAGAATGGCTTGAAATTAAAGAAAGTAAACTTTTGGATTCACTGAGTGACAATAATATTTTGCCAGCCTTGAGGTTGAGCTACTCTTATTTAACGCCGACCTTAAAGCAATGTTTCACTTTTTGTGCTATGTTTCCCAAAGATACAGAAATCTTGAAGGAAGAATTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGGAATAATTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAACTATGCCAAAAATCATTCTTTCAAGACATTAAGATGGATGAATATTCTGGAGACATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAATGGGGCAAGAATGTTTGTATTTGGAGGATGCAAACATGCTTTCTTTGTCAAAAAGCACACACCACATAAGTTTTGACTCTAGTGACTCGTTATCATTCGATAAGGGTGCCTTCAAAAAAGTCGAATCCTTGCGAACATTGTTTCAGTTGAGTAGTTATTCCAATGCAATACATGATTACTTCCCAACAAACTGTTCTGTTCGGGTATTATGCACATCACATGTATCATCACTAGGGAGATTCATTCATTTAAGGTATTTGAAGCTTCATTCTCTTGACATAAAAACATTGCCGGACTCAATTTACAACTTACAAAAATTGGAAATcttgaaaataaaagattgtCATAAACTGAGTTGTCTTCCAAACCGCTTGGCATGCTTACAAAATCTTAGACATCTAGTCATTGAAAATTGTTCTTTGTTGTCTCATTTGTTTCCAAACATTGGAACATTATCTTGCCTAAGAACATTAAGTTTATTCATTGTTAGTTTAGAGAAAGGTAATAGCTTGGCAGAATTACGTGGTCTAAACCTCGGTGGAAACTTAAGCATTGAAGGCTTAAATAATGTTGGCAATTTATTTGAAGCTCAAAAAACCAATTTGATGTGTAAAAAAGACCTCCAACAATTATGTTTGTCatggaaaagaagaagagaCGAATCTACAAAGACCCCTACTGTTAATGCTGAGCAAGTACTTGAAGTTCTTCAACCTCACTCAAATCTCAAGAGGTTAGAAATATGTTACTATGAAGGATTATTCCTACCAAGTTGGATAAGTACTCTTAGTAATTTAGTCTCTCTTGAACTTGCGGATTGTGAGAATTGTGTGCGGCTACCGTCAATTGGTAAACTACAATCTCTAGAAAGATTGTTTTTAAGTGATATGGTTAATCTGAAATActtggatgatgatgaatgtcaTGGTGGTGTGAAGGTGAGGGTTTTCCCATCTCTGGTGGTACTCGTGTTAAGAAACTTGCCAAACTTAGAGGGGTTATTGAAAGTGGAAAGAGGGGAGGTCTTTCCTTGTCTTCCTTGTTTGAGAATCTACTATTGCCCAAAACTTGGATTGCCACGTCTTCCATCTCTTAAAGACCTCACTGTATGGAGATGTAACAATAAGTTACTGAGGTCAATCTCTACCTTATGCGGTCTTACAATCCTCACCCTTAATAATAGAGGTGAAGGAATAACATCATTTCCAGAGGGGATGTTCACAAACcttacttttcttaaaacactGAAAATATGTAATTTTCCAAAATTGAAGGAGTTGCAAAATCAACCCTTTAATGTAGCTTTGGAGCGTCTGAAATTCTTTCATTGTGATGAGCTTGAGTCTTTACCAGAGCAAAATTGGGAAATCCTACAATCCCTTCGATCTCTAAAGATTTATCATTGTAAAGGATTGCGATGTTTGCCTGAGGGTATTCAACATCTCACATCTCTTGAGGTTCTGACAATTGAAGAATGCCCAACATTGGAGGAACGATGCAAGGAGGGAACAGGGGAGGACTGGTACAAGATTGCACATATTCCAAAACTCGAGATTTCATGA 3048 0.3681 MAEALLGVVIENLMSLLQNEFSTISGISSKAQKLSTNLDLIKAVLEDAEKKQVTDRSIKVWLQQLKDAVYVLDDILDECSIEFSRFKGSSSFKPKNIIFRHNIGNRLKEITSRLDEIADRKNKFLLQVDTAKEMPVEVAEWRQTSSIIAEPKVYGREDDKEKIVEFLLNQARDSNSLSVYPVVGLGGVGKTTLTQLVYNDQRVSSTNFHTKIWVCVSEAFSVKRILCSIIESIKSEKCDALDLDVIQRKVQELLQGKRFLLVLDDVWNKNEELKFGLSQEKWNQLKSVLSGGSKGSSCLVSTRDEVVASIMGTCQAHHLSGLSDKECWLLFKQYAFGIDREEQVELVEIGKDIAKKCRGLPLAAQALGGLMHSRSGEKEWLEIKESKLLDSLSDNNILPALRLSYSYLTPTLKQCFTFCAMFPKDTEILKEELIHLWMAHGFISSRNNLEVEDVGSMIWNELCQKSFFQDIKMDEYSGDISFKMHDLVHDLAQSIMGQECLYLEDANMLSLSKSTHHISFDSSDSLSFDKGAFKKVESLRTLFQLSSYSNAIHDYFPTNCSVRVLCTSHVSSLGRFIHLRYLKLHSLDIKTLPDSIYNLQKLEILKIKDCHKLSCLPNRLACLQNLRHLVIENCSLLSHLFPNIGTLSCLRTLSLFIVSLEKGNSLAELRGLNLGGNLSIEGLNNVGNLFEAQKTNLMCKKDLQQLCLSWKRRRDESTKTPTVNAEQVLEVLQPHSNLKRLEICYYEGLFLPSWISTLSNLVSLELADCENCVRLPSIGKLQSLERLFLSDMVNLKYLDDDECHGGVKVRVFPSLVVLVLRNLPNLEGLLKVERGEVFPCLPCLRIYYCPKLGLPRLPSLKDLTVWRCNNKLLRSISTLCGLTILTLNNRGEGITSFPEGMFTNLTFLKTLKICNFPKLKELQNQPFNVALERLKFFHCDELESLPEQNWEILQSLRSLKIYHCKGLRCLPEGIQHLTSLEVLTIEECPTLEERCKEGTGEDWYKIAHIPKLEIS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01537 1015 Gene3D Ribonuclease Inhibitor 498 660 IPR032675 -
Tsu06g01537 1015 Gene3D Ribonuclease Inhibitor 661 855 IPR032675 -
Tsu06g01537 1015 Gene3D Ribonuclease Inhibitor 856 998 IPR032675 -
Tsu06g01537 1015 SUPERFAMILY RNI-like 812 991 - -
Tsu06g01537 1015 CDD RX-CC_like 2 119 IPR038005 -
Tsu06g01537 1015 PANTHER DISEASE RESISTANCE PROTEIN RP 31 992 IPR044974 GO:0006952
Tsu06g01537 1015 Pfam Rx N-terminal domain 6 100 IPR041118 -
Tsu06g01537 1015 PRINTS Disease resistance protein signature 597 613 - -
Tsu06g01537 1015 PRINTS Disease resistance protein signature 357 371 - -
Tsu06g01537 1015 PRINTS Disease resistance protein signature 253 267 - -
Tsu06g01537 1015 PRINTS Disease resistance protein signature 179 194 - -
Tsu06g01537 1015 Pfam NB-ARC domain 156 405 IPR002182 GO:0043531
Tsu06g01537 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 419 IPR027417 -
Tsu06g01537 1015 Coils Coil 31 51 - -
Tsu06g01537 1015 PANTHER OS05G0414200 PROTEIN 31 992 - -
Tsu06g01537 1015 Gene3D - 411 494 IPR036388 -
Tsu06g01537 1015 Gene3D - 137 316 IPR027417 -
Tsu06g01537 1015 Gene3D - 321 409 IPR042197 -
Tsu06g01537 1015 SUPERFAMILY L domain-like 483 851 - -
Tsu06g01537 1015 Gene3D - 6 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01537 Tsu-Chr6 16291737 16294784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01537 184 691 WRKY Transcription Factor Family AT5G45050 24.090 1.88e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01537 - - mtr:MTR_5g071220 1409.05