Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu06g01495 | ATGAAAAAGGCCACAATTCGTATCCAGAAGATTTGGAGAGCAAAATTTGCTCGGGTACTCTATGAGGATATGAGGAAAGAAGCAGCTTCTATCCGGATACAGAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGCTCGGGTACTCTATGAGGATATGAGGAAAGAAGCAGCTTCTATCCGGATACAGAAACATGCGCGTGCACATAGAGCAAGAGTGTATTATACATCATTACAAGCATCAGCTATTGTTATACAATCAGGTTTGAGAGCATTAGCGGCACGAAACGAATATAGGTACAGAAGAAGAACAAAAGCTTCAACAAAAATTCAGACACAATGA | 402 | 0.3159 | MKKATIRIQKIWRAKFARVLYEDMRKEAASIRIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARVLYEDMRKEAASIRIQKHARAHRARVYYTSLQASAIVIQSGLRALAARNEYRYRRRTKASTKIQTQ | 133 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu06g01495 | 133 | Coils | Coil | 21 | 35 | - | - | |
| Tsu06g01495 | 133 | Pfam | IQ calmodulin-binding motif | 3 | 21 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | Pfam | IQ calmodulin-binding motif | 77 | 95 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | Pfam | IQ calmodulin-binding motif | 100 | 119 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | PANTHER | MYOSIN | 1 | 37 | - | - | |
| Tsu06g01495 | 133 | PANTHER | MYOSIN | 64 | 133 | - | - | |
| Tsu06g01495 | 133 | ProSiteProfiles | IQ motif profile. | 75 | 101 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | ProSiteProfiles | IQ motif profile. | 1 | 30 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | ProSiteProfiles | IQ motif profile. | 98 | 127 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | PANTHER | MYOSIN-12 | 64 | 133 | - | - | |
| Tsu06g01495 | 133 | SMART | iq_5 | 97 | 119 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | SMART | iq_5 | 74 | 96 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | SMART | iq_5 | 1 | 22 | IPR000048 | GO:0005515 | |
| Tsu06g01495 | 133 | PANTHER | MYOSIN-12 | 1 | 37 | - | - | |
| Tsu06g01495 | 133 | Gene3D | - | 72 | 129 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu06g01495 | Tsu-Chr6 | 15503698 | 15504398 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu06g01495 | 65 | 131 | Myosins gene family | AT2G31900 | 67.164 | 7.38e-22 | 88.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu06g01495 | K10357 | - | gmx:100786418 | 120.938 |