Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01493 ATGCACTGGAAAGGCATCGTGAGCAATTTGTTGCTTCGTCGCGAGTGCTGCTCCTTTAGCAATGGAAAATATTTGAAGGCAGGTTTGCATGAGTTGGAACTATGGTGTCTCATAGCAACAGATCAgTTTTCTTTGCAGATTGCAGGGTCATCTTGGGGTGAACTCAAACATATACGCCAAAGTGTTGGATTTCTGGTCTTGCATCATAAGACTCAAAATACTTTGGAGGAGATCACAGATGAACTCTGCccgGTGTTAAGTATTCCAGAAATATATCGCATTGGAACTATGTTCTGGGATGACAAGTATGGAACACAAGGATTATCTCCAGAGGTCATTAGCAGAACGAGAGTACTTATGACAGAAGACTCAACAAACATACTGAATAACTCATTCCTTCTAGAGGTGGAATCCAGgtaa 420 0.4071 MHWKGIVSNLLLRRECCSFSNGKYLKAGLHELELWCLIATDQFSLQIAGSSWGELKHIRQSVGFLVLHHKTQNTLEEITDELCPVLSIPEIYRIGTMFWDDKYGTQGLSPEVISRTRVLMTEDSTNILNNSFLLEVESR 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01493 139 ProSiteProfiles Dilute domain profile. 1 122 IPR002710 -
Tsu06g01493 139 Pfam DIL domain 8 101 IPR002710 -
Tsu06g01493 139 PANTHER MYOSIN 8 136 - -
Tsu06g01493 139 SMART DIL_2 1 104 IPR002710 -
Tsu06g01493 139 PANTHER MYOSIN-11 8 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01493 Tsu-Chr6 15498988 15500224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01493 6 138 Myosins gene family AT1G54560 65.414 8.03e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01493 K10357 - gmx:100817933 218.009