Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01466 ATGGCCAATTCTAACTGGTCTCAAATTTTTTTGTCCATAAACATCATAATAATATTGGCAACCTTTTTCACATGCAACATCAATTTTGCATTTGGAACAGACCCATTTCTTCAACAAAAGAGAGACAGGGTTGATGAGCCACTCCCAGGTCAAAACTTCAACATCAACTTTAAACATTATTCTGGGTATATTACTGTCAACGAGGATGTTGGTAGAACATTGTTTTACTGGTTCATTGAAGCAGATCATGTAGACCCTTCTTCAAAACCACTTCTTTTATGGCTTAATGGTGGACCTGGTTGTTCATCTATTGCTTATGGTGAAGCTGAGGAAATTGGTCCTTTTCATATTAATTCAGATGGCAAAACCCTTTATCTTAATCCTTATTCTTGGAATAAAGttgCCAACATTCTTTATATTGATTCTCCTACTGGAGTTGGATTTTCATATTCAAAGAATTCATCTGACATTCTCAACAATGGTGATAAGAGGACAGCTGAGGACAATCTCATATTTCTACTGAAGTGGTTTGAGCGTTTTCCCCAGTACAAAAAAACAGACTTTTTCATCAGTGGTGAGAGCTATGCAGGACATTATGTTCCCCAACTTAGCCAAGTTATTGTCAAGCACAACTCAGCTACAAAACATAATTCTATAAATCTGAAAGGTTACTTGGTAGGAAATGCTCTAACAGATGATTTCAATGATCAATTGGGGATTTTCCAGTTTATGTGGTCAAGTGGTCTGATTTCGGATCAAACATTCAAGCTCTTGAATCTACTATGTGATTTTCAGTCAGTCGAACACCCGTCAAAATCTTGTGAAAATATCTTGGAAATTGCTAGTAATGAAATGGGTAATATAGATCCATACAGTATCTTTACCCCTCCTTGCCATGGGAGTGCTAATCAGCGGGTTAAAAGACCGCATAGTCTTGGAAGACTGAGAAGTGTGTATGATCCTTGCACAGAGAAGCACAGCACTGTATACTTCAACCTGCCAGAGGTCCAAAGGATTCTACATATTGATCCTGATCATAAACCTGCTAAATGGGAGACCTGCAATATGGACGTAAATACAAACTGGAAGGATTCACCTAGAACAGTACTCGATATATATCGTGAACTTATTCCTACTGGGCTGCGAATATGGATTTTCAGTGGTAATACAGATGCTGTAATCCCGGTAACATCTACTCGCTATACCATAGCTGCTCTCAAGCTTCCAACTGTGAGCCCTTGGCATGCATGGTATGATGACGGAGAGGTAGGTGGTTGGACTCAAGAATACGCCGGGCTCACGTTTGTAAACGTAAATGGTGCAGGGCATGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAACGCTGTTCAAAGCTTTCTTAGCAGGAACCTCCATGCCAACTCTTGAGCCACCCTCACTCACGGCTGCCTATTGA 1437 0.4001 MANSNWSQIFLSINIIIILATFFTCNINFAFGTDPFLQQKRDRVDEPLPGQNFNINFKHYSGYITVNEDVGRTLFYWFIEADHVDPSSKPLLLWLNGGPGCSSIAYGEAEEIGPFHINSDGKTLYLNPYSWNKVANILYIDSPTGVGFSYSKNSSDILNNGDKRTAEDNLIFLLKWFERFPQYKKTDFFISGESYAGHYVPQLSQVIVKHNSATKHNSINLKGYLVGNALTDDFNDQLGIFQFMWSSGLISDQTFKLLNLLCDFQSVEHPSKSCENILEIASNEMGNIDPYSIFTPPCHGSANQRVKRPHSLGRLRSVYDPCTEKHSTVYFNLPEVQRILHIDPDHKPAKWETCNMDVNTNWKDSPRTVLDIYRELIPTGLRIWIFSGNTDAVIPVTSTRYTIAALKLPTVSPWHAWYDDGEVGGWTQEYAGLTFVNVNGAGHEVPLHRPKLALTLFKAFLAGTSMPTLEPPSLTAAY 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01466 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 470 IPR001563 GO:0004185|GO:0006508
Tsu06g01466 478 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Tsu06g01466 478 Gene3D - 369 463 - -
Tsu06g01466 478 Pfam Serine carboxypeptidase 49 462 IPR001563 GO:0004185|GO:0006508
Tsu06g01466 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Tsu06g01466 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Tsu06g01466 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Tsu06g01466 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Tsu06g01466 478 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 17 470 - -
Tsu06g01466 478 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Tsu06g01466 478 Gene3D alpha/beta hydrolase 39 300 IPR029058 -
Tsu06g01466 478 SUPERFAMILY alpha/beta-Hydrolases 47 466 IPR029058 -
Tsu06g01466 478 Gene3D - 322 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01466 Tsu-Chr6 14910250 14913841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01466 349 466 Calmodulin-binding Proteins AT2G22960 25.210 3.06e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01466 K16297 - gmx:100805227 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01466 06 14910250 14913841 Tsu06g01466 06 14910250 14913841 ECH