Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01438 ATGGCTAAAAGGGCTGTGCTAATAGGGTGCAACTATCCAGGTACAAAAGCTGAGCTAAAAGGGTGCATTAACGATGTATGGAGGATGCACAAATGTCTCATTGAGAAATATGGATTCTTAGATGAGGATATCACTGTTCTCATTGACACCGACCGTTCTTACACACAACCAACCGGAAAAAACATTCGATATGCCATTTCAAAGTTGGTTAAATCGGCTCAACCTGGTGACGTGCTCTTTGTCCACTACAGCGGTCATGGCACCCGTCTTCCTGCTGAGATCGGGGAAGATGATGATACTGGCTATGATGAGTGCATTGTTCCCACAGATATGAATCTAATTACtgATGAAGATTTCAGGGATTTTGTAGAAAAGGTACCTAAAGGTTGTAGGATCACAATTGTATCAGATTCTTGTCATAGCGGAGGATTGATTGAAGCAGCAAAGGAGCAGATAGGTGATAGTACAAAGGAAGGGGGACATAATTCATCCACAGGCTTCAAAAATATCCTTACCAGAACAACTGCGAAAGATACCATCAAATCTCATGATATTGGAGAAAAACACGTTGATCTTCATCATCGAGACCATAGCTATGTGAAGAATAGGTCTTTGCCTCTTTCAACTTTTATTGAAATGCTAAAGCTGAAAACCGGAAAAGATGACGTAGAAATTGGAGAAATAAGACCTACCCTATTTTATATCTTCGGGGAAGATGCTAGTCCTAAAGTTAAGAACTtcattaagtttgttttgaaCAAATTTAAACATGGAGGTGTTGAGAATGAAGGTCATGGAGGAATTTTGGGGCTGGTGAACAATCTTGCTGAAGGGCTTCTTAAACATATGCTGCTGATTGAAGATGATGAGGAAAACGAAAATCCTGTCGAACTTACAGAAGAATCATATGCTACATCAACTAAGCGCAGCATTGTAGATGGTGGAATTCTACTGAGTGGTTGCCAAACTGACCAAACTTCAGCAGATGCAAGTCCTAATGGAAATTCTGATGAAGCTTATGGGGCGTTTAGTAATGCCATACAAGCTATAATTGCAGGGAAAGGTGTAGTTACGAATCGAGACCTTATCTTGAAGGCTAGGAAGAAACTTCATAGGCAAGGTTATACTCAGAAGCCAGGACTCTATTGTAGTGACAACAACGTCGACGCTCCTTTTATATGCTGA 1185 0.4017 MAKRAVLIGCNYPGTKAELKGCINDVWRMHKCLIEKYGFLDEDITVLIDTDRSYTQPTGKNIRYAISKLVKSAQPGDVLFVHYSGHGTRLPAEIGEDDDTGYDECIVPTDMNLITDEDFRDFVEKVPKGCRITIVSDSCHSGGLIEAAKEQIGDSTKEGGHNSSTGFKNILTRTTAKDTIKSHDIGEKHVDLHHRDHSYVKNRSLPLSTFIEMLKLKTGKDDVEIGEIRPTLFYIFGEDASPKVKNFIKFVLNKFKHGGVENEGHGGILGLVNNLAEGLLKHMLLIEDDEENENPVELTEESYATSTKRSIVDGGILLSGCQTDQTSADASPNGNSDEAYGAFSNAIQAIIAGKGVVTNRDLILKARKKLHRQGYTQKPGLYCSDNNVDAPFIC 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01438 394 PANTHER METACASPASE-4 1 394 - -
Tsu06g01438 394 Pfam Caspase domain 3 389 - -
Tsu06g01438 394 Gene3D - 1 216 - -
Tsu06g01438 394 Gene3D - 280 393 - -
Tsu06g01438 394 PANTHER METACASPASE-5 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01438 Tsu-Chr6 14240735 14243698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01438 - - cam:101509553 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01438 06 14240735 14243698 Tsu06g01438 06 14240735 14243698 ECH