Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01437 ATGTTCTTCAGATTACTATTTACAGACCTTGGTGGAGAACGCCGATTTGCATCAGCTGTTGCTAAGAGATTAGAATCCCTTGGGGCTTTGACTCAGGGGGATCGCAGGGCTGGACCTTCATTAAGTGCATATAATTATGATAGTGCTTATGGGAAGAAGGCTCTGAAGATTTTGTACACAGGAATAACGGAGATgGTACGTCCAGGATGCTTATCTGATAGAGCAGATAAAATGAAAAGTTTTATTAGACGGGCAGAAGCTGCTCTTAATTCTGTTGGAATGGAAGACATTTATGAAAAACAAAGCTATGATGTTCGGCGATTTCTCAACCGGCTTTTGGGAATAGCTCCTGACATTCAGAAtagGCTATTTGAGATATTTGTGCATATCTTGGATGATCTTGTTCAAAAAGCTCGCATTGAAGGCAATCTTGACATAGGCATTGTTGACTTGAAAGCTAATGTCATTGAACTGCAAGGGACTCCAAAGACAGTCTATGTTGATCAAACGAGAGGGGCTTCAACTGTTTTGTTCACATTTATCTTGGATCGTGGGGTTTCATGGGAGTTAGCAAATACCAAGCTGAATGAGAAGCAGAAAGCTGAATTTGTTTCATCTGGTGATGGCTTCTACAAGTCCAAGAGGCATTGGTTGGGAAAACATCGTGTTATTTTAACATTTGAAAgTTCTAATTCAGCTATGTATAAGATAGTGCGTCCCACTACCGGAGAATCAACTCGGGATATGCATATAGAAGAATTAACtagaaaatattcaaaagttTCATCTTTAAAGGAGGCCAAAATTGGTTGGGAGGACGACTATGAAGCTTCATCTAAACAGTGCATGCATGGTCCCTATTGTAAGTTTGGTAAATCATGTTCAGCTGGCTCAAGACTACAGGAAGTAAATGTCTTAGGTGGTGCCATTCTTCCTGTTTGGGGAAACATACAAACGGTTCTTTCTGACCAGGTCCGACAAATGGATAAGAGGTTACGCATTGTTCGTGTTGAAACTACATCAGATAATAGACGTTTTGTTGGGGTTCGTATACCTAATGAAGCAGTTGAAACTGTTCTTGaaggtttctttctttttctctgcaTCCCTTCGCCTTTTCTTTAA 1125 0.3893 MFFRLLFTDLGGERRFASAVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKKALKILYTGITEMVRPGCLSDRADKMKSFIRRAEAALNSVGMEDIYEKQSYDVRRFLNRLLGIAPDIQNRLFEIFVHILDDLVQKARIEGNLDIGIVDLKANVIELQGTPKTVYVDQTRGASTVLFTFILDRGVSWELANTKLNEKQKAEFVSSGDGFYKSKRHWLGKHRVILTFESSNSAMYKIVRPTTGESTRDMHIEELTRKYSKVSSLKEAKIGWEDDYEASSKQCMHGPYCKFGKSCSAGSRLQEVNVLGGAILPVWGNIQTVLSDQVRQMDKRLRIVRVETTSDNRRFVGVRIPNEAVETVLEGFFLFLCIPSPFL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01437 374 PANTHER OS08G0223700 PROTEIN 3 363 - -
Tsu06g01437 374 Pfam C-terminal domain on Strawberry notch homologue 3 150 IPR026937 -
Tsu06g01437 374 PANTHER STRAWBERRY NOTCH-RELATED 3 363 IPR026741 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01437 Tsu-Chr6 14237171 14239597 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01437 - - mtr:MTR_2g063813 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01437 06 14237171 14239597 Tsu06g01437 06 14237171 14239597 ECH