Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01397 ATGACTTGGTCACACAAATTCATAAACCTTGTTGATTACTATACACATCTTCTTCAAAATTCACCAAGTGGAACAATCCATGTTCATGTTTTAGGTAACACTATTACCTCAAATCCACAAAATGTTGAATACATCCTCAAAACAAATTTCAACAACTACCCAAAAGGTAAACAATTTTCCACAATTCTCGGCGATCTTCTCGGCCGTGGTATCTTCAACGTGGATGGCGATTCGTGGAAATTTCAGCGAAAAATGGCGTCGCTTGAGCTCGGTAGTGTAACAATTCGCTCCCACGCTTTTGAACTTGTCACAGAAGAAATCAAAACAAGGCTTATTCCTCTGATCTCTTCGTTTACAAAGGAGAAAACTGTGAAGAGTGTCACAAAACCAGAGGAAGAATCCAAAGCAGACAATATCTCGGAAAACGAGGATGTTGTTTTGGACATGCAAGATATTCTTAGAAGATTCTCATTTGACAACATTTGTAAATTCTCTTTTGGGTTAGACCCATGTTGTCTTGTTCCATCACTTCCAATTTCAAATCTTGCTAATGCTTTTGATTTATCATCAAAGCTTTCAgctcaaagagcaatgaatgcTTCTCCAATAATATGGAAGATGAAACGATTCTTCAATGTTGGGTCAGAGAAGAAGCTGAAAGAAGCAATTAAAATAGTCAACGATTTAGCAAATGAGATGATAAAACAGAGACGAGAAATTGAAAATGGAGTTGACTCGCGAAAAGATCTTTTATCTCGTTTCATGGGTTCTTTGAATTCAAACGACGATgaatatttaaaagatattgTCGTTAGTTTTCTTTTAGCTGGTCGTGATACAGTTGCTTCCGCGTTAAccggtttttttattttattgtcaaaaaaccCAGAAGTCGAAAAAAAGATTCGGGTTGAGTTAGACCGGATAATGAACCCGGTTCAAGATTGTGCTACTTTTGAACAAACGCGCGAAATGCATTATCTTAATGGAGCTATTCATGAGAGTATGAGGCTTTTTCCACCGGTTCAGTTCGATTCAAAGTTTGCATTGGAAGATGATGTGTTACCCGATggaacttttataaaaaagggGAGTCGGGTTACTTATCACCCGTACGCAATGGGTCGGATGGAGAATATTTGGGGACCGGATTGTTTGGAATTTAAACCGGAAAGATGGTTGAGGGAAGGTGTGTTTGTACCGAAATGTCCTTTTAAATATCCGGTTTTTCAAGCCGGTTCGAGAGTTTGTTTGGGAAAGGAGTTGGCTATTGTGGAGATGAAGGCTGTTGTAGCTGCATTAGTAAAACGGTTTGATGTTCGGGTTGTTGGATCGAATCAGGAGCCACGGTTTGCTCCCGGTCTAACTGCCACGTTTAGAGGTGGTTTGCCGGTTGAAGTTTATGAAAGAACGTAA 1416 0.3736 MTWSHKFINLVDYYTHLLQNSPSGTIHVHVLGNTITSNPQNVEYILKTNFNNYPKGKQFSTILGDLLGRGIFNVDGDSWKFQRKMASLELGSVTIRSHAFELVTEEIKTRLIPLISSFTKEKTVKSVTKPEEESKADNISENEDVVLDMQDILRRFSFDNICKFSFGLDPCCLVPSLPISNLANAFDLSSKLSAQRAMNASPIIWKMKRFFNVGSEKKLKEAIKIVNDLANEMIKQRREIENGVDSRKDLLSRFMGSLNSNDDEYLKDIVVSFLLAGRDTVASALTGFFILLSKNPEVEKKIRVELDRIMNPVQDCATFEQTREMHYLNGAIHESMRLFPPVQFDSKFALEDDVLPDGTFIKKGSRVTYHPYAMGRMENIWGPDCLEFKPERWLREGVFVPKCPFKYPVFQAGSRVCLGKELAIVEMKAVVAALVKRFDVRVVGSNQEPRFAPGLTATFRGGLPVEVYERT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01397 471 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 Gene3D Cytochrome P450 4 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PANTHER CYTOCHROME P450 2 469 - -
Tsu06g01397 471 PANTHER CYTOCHROME P450 94C1 2 469 - -
Tsu06g01397 471 Coils Coil 219 239 - -
Tsu06g01397 471 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01397 471 SUPERFAMILY Cytochrome P450 10 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01397 Tsu-Chr6 13383605 13385020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01397 2 471 Cytochrome P450 AT2G27690 59.789 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01397 K20624 - gmx:100813091 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01397 06 13383605 13385020 Tsu06g01397 06 13383605 13385020 ECH
Tsu02g04698 02 56090216 56091655 Tsu06g01397 06 13383605 13385020 ECH