Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01360 ATGGCGGAAGAACATAGATGTCAAGCAGCTCAGCGTCTCTGTGCTAACAACTGCGGTTTCTTTGGTAGTCCAGCCATGCAAGATCTTTGTTCTAAATGTTACTGTGATTTGCAGATGAAAGAACAACGTTCTTCTTCGGCGAAATTGGTTCTTAATCAAACGCTATTGATTTCTCCTGAGACTAATATTGTTCAGCCATCGGCTTCAACGTCGGTGGTTGATTCTTGTACTTTACCGGTCATGGTTGAATCATTGATTGTCGGATCTTGTGAGACGGTATCGGTTGTTCAGCCGAATCAGTGTGGGACATGTAGGCGGCGCGTGGGGTTGACGGGATTTAAGTGCAGATGCGGATTGACGTTGTGTGGGTCCCACAGGTATCCGGAGATGCATGGATGTGGGTTTGATTTTAAGGGAATGGGAAGAGAGCAGATTGCGAAAGCGAATCCTGTGGTGAAGGGAGAGAAACTCAATAAGATATGA 483 0.4596 MAEEHRCQAAQRLCANNCGFFGSPAMQDLCSKCYCDLQMKEQRSSSAKLVLNQTLLISPETNIVQPSASTSVVDSCTLPVMVESLIVGSCETVSVVQPNQCGTCRRRVGLTGFKCRCGLTLCGSHRYPEMHGCGFDFKGMGREQIAKANPVVKGEKLNKI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01360 160 Gene3D - 1 54 - -
Tsu06g01360 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Tsu06g01360 160 SMART A20_3 11 35 IPR002653 GO:0003677|GO:0008270
Tsu06g01360 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 160 - -
Tsu06g01360 160 Pfam A20-like zinc finger 12 34 IPR002653 GO:0003677|GO:0008270
Tsu06g01360 160 Gene3D - 87 156 IPR035896 -
Tsu06g01360 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 61 - -
Tsu06g01360 160 ProSiteProfiles Zinc finger A20-type profile. 8 42 IPR002653 GO:0003677|GO:0008270
Tsu06g01360 160 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 160 - -
Tsu06g01360 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Tsu06g01360 160 SUPERFAMILY AN1-like Zinc finger 96 155 IPR035896 -
Tsu06g01360 160 Pfam AN1-like Zinc finger 101 137 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01360 Tsu-Chr6 12785439 12786516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01360 1 160 C2H2 Transcription Factor Family AT3G52800 45.355 6.15e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01360 - - gmx:100807363 213.772