Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01355 ATGGCAAGTCAAAGAATTGGAGAAATTGGTTTGTCTGAAGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATCACTAACTCAACATCAACCTTAATgAATCAAGGGTCAGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTTCAAGGAATTAAGATAAGAAACGATGAAGGAAAAACACCAGCTTTATTCACAAGTAAACCAGCAGCTACACTTGAAATGTTTCCTTCTTGGCCAATTAGATTTCAACAAACACCAAGAGGAGGTTCAAAGTCAGGAGGAGAAAGCACTGATTCAGGATCAACAGAGTTACAATTTGATACAGATTCTCCATTAAGTGTAAAAGCATCTTCATCAGATCAtcataataatcataatcataaccATGCTTTTGATCAACAACTTCAGCAGCAGGAGACAGGAACTGATGATGGCTTAAGAACAGACACATCACAGAATCAATCAAAAGCCAAATCACATCAAGAAAAGAAAAAAGGAGCTATTTCAACATCAGAAAAGACACTTGATCCAAagACACTGAGACGTTTGGCACAAAATAGAGAAGCTGCAAAGAAAAGTCGTCTAAGAAAAAAGGCTTATGTGCAGCAGCTAGAGACTAGTAGATTAAGACTATCCAATCTAGAACAAGATCTTCAAAGAGCACGCTCTCAGaataaaGTACAAGTGATACTGAATccacaaaaatcaaataatgtAGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTTGAAGAAGATCAACGACATTTGGCGGAACTTAGGGCCGGGCTGCATGCGACATTACCGGATAATGAACTAAAAGTAATTGTGGATGGATATTTGTATCATTACGATGAACTTTTCCGATTGAAGGGCGTGGCTGTTAAATCAGATGTGTTTCATCTAATTAAAGGCATATGGGCTTCTCCTGCTGAAAGACCCTTCATTTGGATAGGTGGTTTCAAACCCTCAGAACTCATCAcgATGTTGACACAACAGTTAGAGCCCCTAGCAGAGCAGCAAATAGCAGGGATAATGGATCTAGGGCAATCGGCATTTCAAGCAGAAGAAGCTCTTTCTAAAGGCCATGAACAGCTCCACCATGCTATTGTTGACACCATCGCCGGAGGGGCCGTCATTGACGGTGTGCAACAAATGGTTGCTGCCATGGCCAGAATTTCTAACCTTGAAGGATTTGTCTATCAGGCTGATAATTTGAGGCAACAAACTCTTCATCAACTATGTCGAATACTCACAGTTCGTCAAGCAGCACGGTGTTTTCTTATTATTGGAGAGTATTATGGGCGTCTTCGAGCTCTTAGTTCTCTTTGGGCTTCAAGACCACGAGAGAACGTGATGAACGATGATAATTCATGCCAAACAACCACGGAATTGCAAATGGTTCAACCTTCTCAGAGTCATTTCTCAAGTTTctga 1458 0.3951 MASQRIGEIGLSEGPSSQHVPYGVLHGITNSTSTLMNQGSAFDFGELEEAIVLQGIKIRNDEGKTPALFTSKPAATLEMFPSWPIRFQQTPRGGSKSGGESTDSGSTELQFDTDSPLSVKASSSDHHNNHNHNHAFDQQLQQQETGTDDGLRTDTSQNQSKAKSHQEKKKGAISTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLETSRLRLSNLEQDLQRARSQNKVQVILNPQKSNNVGAAMFDMEYARWLEEDQRHLAELRAGLHATLPDNELKVIVDGYLYHYDELFRLKGVAVKSDVFHLIKGIWASPAERPFIWIGGFKPSELITMLTQQLEPLAEQQIAGIMDLGQSAFQAEEALSKGHEQLHHAIVDTIAGGAVIDGVQQMVAAMARISNLEGFVYQADNLRQQTLHQLCRILTVRQAARCFLIIGEYYGRLRALSSLWASRPRENVMNDDNSCQTTTELQMVQPSQSHFSSF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01355 485 Gene3D - 182 235 - -
Tsu06g01355 485 MobiDBLite consensus disorder prediction 161 185 - -
Tsu06g01355 485 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Tsu06g01355 485 PANTHER TRANSCRIPTION FACTOR TGA9 65 464 - -
Tsu06g01355 485 MobiDBLite consensus disorder prediction 88 124 - -
Tsu06g01355 485 ProSiteProfiles DOG1 domain profile. 246 454 IPR025422 GO:0006351|GO:0043565
Tsu06g01355 485 PANTHER TRANSCRIPTION FACTOR TGA9 65 464 - -
Tsu06g01355 485 Coils Coil 202 229 - -
Tsu06g01355 485 MobiDBLite consensus disorder prediction 86 185 - -
Tsu06g01355 485 Pfam bZIP transcription factor 183 225 IPR004827 GO:0003700|GO:0006355
Tsu06g01355 485 MobiDBLite consensus disorder prediction 134 160 - -
Tsu06g01355 485 Pfam Seed dormancy control 263 338 IPR025422 GO:0006351|GO:0043565
Tsu06g01355 485 SUPERFAMILY Leucine zipper domain 183 228 IPR046347 GO:0003700|GO:0006355
Tsu06g01355 485 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Tsu06g01355 485 SMART brlzneu 179 241 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01355 Tsu-Chr6 12729969 12736619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01355 123 485 bZIP Transcription Factor Family AT1G08320 61.035 6.75e-156 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu06g01355 DOG1 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01355 K14431 - gmx:778195 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01355 06 12729969 12736619 Tsu06g01355 06 12729969 12736619 ECH