Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01348 ATGGCAGAGACGGAGGATCTTCCCAAAACTATCGTACGCCGCGTGGTGAAGGATAAGCTATCCACTTGCTCCGACGACGGCGACATTGCCGTCCATAAAGACGCTCTTCTCGCATTCTCCGAAAGTGCAAGAATCTTCATCCACTACCTTTCGGCTACGGCTAATGATATATGTAGGGAGTCAAAGAGACAAATTATCAATGCTGAAGATGTTTTCAAAGCTCTTGAAGAAACTGAGTTTACTGAATTTGTTAGCCCTTTAAAAGCTTCTCTTGAAGAGTTTAGGAAGAAGAATGCTGGGAAGAAAGCGGCAGTGTCAAAGGAAAAGGGAGATGAGAAAggaaatgagaagaaaaagaaaagaaagttgGAAAAAGGTGAGCCATCTGATAAAGGcgatggtggtggtgatgacCAATAA 420 0.3857 MAETEDLPKTIVRRVVKDKLSTCSDDGDIAVHKDALLAFSESARIFIHYLSATANDICRESKRQIINAEDVFKALEETEFTEFVSPLKASLEEFRKKNAGKKAAVSKEKGDEKGNEKKKKRKLEKGEPSDKGDGGGDDQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01348 139 Coils Coil 58 78 - -
Tsu06g01348 139 Gene3D Histone, subunit A 1 136 IPR009072 GO:0046982
Tsu06g01348 139 SUPERFAMILY Histone-fold 7 118 IPR009072 GO:0046982
Tsu06g01348 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 7 75 IPR003958 -
Tsu06g01348 139 MobiDBLite consensus disorder prediction 97 139 - -
Tsu06g01348 139 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01348 7 111 CCAAT-HAP3 Transcription Factor Family AT4G14540 30.476 5.11e-11 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Tsu06g01348 CBFD_NFYB_HMF 2.4e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01348 K02326 - gmx:100306382 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01348 06 12671151 12673024 Tsu06g01348 06 12671151 12673024 ECH