Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01306 atggTTTCCAACAAGAAAAACCTTATAAGAACATTTTTCACTTCAAATGGAAGTTGTGGATCATGTGCAAAATCAAAAGCAATTCAAGTACATGAACCAacccaaaaacccaaaatttcCATTAACCAAAAGATCACAAACCCAAGTAGTAAAGGTTCTTCCACTACAAATTCAGGTGAACCAAACGGCGCCGTTTGTAGCATCGACGATAGCGAAGATTTCTCCACCACTACCTTTTCTGAAGGTGAGACAACAAACAACTACTTTGTACCCAAACAAAGTCCACTAATGAACACCGTGGCGGTTGAGAAGGACTCGGAGGATCCATATCACGATTTCAAACACTCTATGCTTCAAATGATATTTGAGAATGAGATCGATTCGGAGGATGATCTTCAAGATCTTCTTCGGTGTTTTCTTCATCTCAATTCTAGTTGTTATCACAGTGTGATCGTTAAAGTCTTCGATGAAATCTGCCATGAAGCTTTTCCCGATAAGTACATCTGA 507 0.3728 MVSNKKNLIRTFFTSNGSCGSCAKSKAIQVHEPTQKPKISINQKITNPSSKGSSTTNSGEPNGAVCSIDDSEDFSTTTFSEGETTNNYFVPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHSVIVKVFDEICHEAFPDKYI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01306 168 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 167 - -
Tsu06g01306 168 MobiDBLite consensus disorder prediction 35 82 - -
Tsu06g01306 168 Pfam Transcriptional repressor, ovate 106 161 IPR006458 -
Tsu06g01306 168 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Tsu06g01306 168 MobiDBLite consensus disorder prediction 30 82 - -
Tsu06g01306 168 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Tsu06g01306 168 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 167 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01306 Tsu-Chr6 12319912 12321453 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu06g01306 Ovate 8.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01306 - - mtr:MTR_4g052040 276.174