Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01299 ATGGAATCTAAGATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGTGCTTTTGGTGCTGCTATTCTTGTTAATCATAAAGCTGAGAAGAAAAAATATGTGTTGAAGAAAATCAGGCTTGCTAGACAGACTGAGAGATGTAGAAGATCTGCTCATCAAgaaATGGCTCTTATTGCAAGAATCAAGCACCCTTACATTGTGGAATTTAAGGAAGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACCGGATACTGTGAAGGTGGAGACATGGCTGAAACGATGAAAAAATTAAACGGCACTTACTTTCCCGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTTTTGGCAGTAGAATACCTTCATTCAAATTATGTTTTACATCGCGACTTAAAGTGTTCCAACATCTTTCTTACAAAGGATCAGGATATTCGCCTTGGCGATTTTGGACTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCGAATTACATGTGTCCTGAACTGCTTGCAGATATTCCATATGGATTCAAATCAGATATTTGGTCATTAGgCTGCTGTGTATACGAGATGGCTGCTCATCGCCCTGCCTTTAAAGCATTTGATATGGCAGGATTGATAAGCAAGATAAATCGTTCCTCTATCGGCCCTTTGCCTCCGTGTTATTCCCCTTCATTGAAAATACTAATAAAAGGCATGTTGAGAAAAAGTCCCGAGCATCGACCAACAGCATCTGAGGTTTTGAAGCACCCTTATTTGCAACCTTACGTCGATCAATATCGTCCATCTTTCGCTCCTCAAACAGCATTTTCTCCTGAAAAACCAATTTCTGCTGTCAAGGATACTAAAAGACATATGGCTGAAAGTCAAAACAGTACTAGTTCAAGTAGTGACAAAGATAGTTTAATGTCAAATGACAGAAACATTGCAACAACAGCGCCAAAGTGTGATAGCACAGCCACCGATATGGATATTGGTGATGATGGCTCAGAGAATCTCCAAGAGGTGATAAAATCATCTCATAATGAACAGCATTCTAATGTTGAATCTAAACTACAGCCAAGAACAATCAGAAATATAATGATGGCATTGAAAGAAGGGAGAGGTAGAGAAGCTACTTCTCCGATGAGAGGTAGAGAAGCTACTTCTCCGATGAGAGGCAGTCGTGTAAAGACTGGTGGAGTATCGACACCGAAAGTAAATACTGACGTACCGTCTAAATTGCCTAAACCGACTTTCATTGCTCCTAGTTTGAAGCCTAATTTAGAATCGCCAACTGTTCCACTAAAGGCATCCCCTGATTCTTCGAAACGAATATATGGATCGCCTCATTCAAAACTTCAGTTGCTGATGACCGAGCCGTCACCAAAAGTTAAACCGAAACAAGATACGACTCCACCATCTGGTTCTATCAAACAACAAGGAGAAGGAGATGGAGTTCCTCCTAGGCCAAGGCAAAGAACTCCCCCGAGCTTACTTCGACGACCTACTTTTCCAGGACGAATGAGGCTTGCAGGGACTGATGTTCCAAATGCAGCGAACGATAGCGGGAAGCTAGGTCCAAGTAATACAGGGCAGGAGTCTGAGACGAGCCACTGTCAGTTGTTCAATGGAAGCATACCGCGTATTTCTAGACCGTTTATTAGAGAACCTCAGAATGCTTTCGAAAGAAGTTCTAAAGGAATGCAAACAGACAGTAGTAATTCTGCCTCGTCTTCAGTTTCGATTCAAGGATGTGAACTTGCTGATGATGCAACAACTTTTATTGACATGAGAGAACATATTCTTCCTGATCATGACAATGAAACAAATGTTGTCGGTGTTGAATCACATCCAGACCGCAGCTCATCGACAACCTGTTCACATTGTAAGATGGCTGAAGAAGCGTCCGAGGAAACCTGTGAAGTCACCATGAATTTTCAGAGTACTATTAGTAGTAATGAAAAAGTGAGTTCCAATTTAACTCTTGATCATCCTGCTGAAAATTCTAAGGAAATGTTTGCTTCGGAATATAGTCACCCGAGAAATCAGACAACTATATCTACTGCTTCCGTGTGTGATAATAGATCTGTTGACCCGCCTGCTGAAGCGGCCGAAGAAATCGAAGATCTTCGAGATGTTTCTAAGGAAATGGATTTAACCAAGTCTCCCAAACATCCACCTTCAATTTCTGGAGAAAACTCTGTTTGTGAAGAAGTTGGTTCGGTAAACAAACTCAATAATAGGCCTGAAACTGTCACTGGTGATGACAAATTCACAGTGAAGGAGCGATTGTCGTTGGTCGCTGAAACTGATCCTATAACTACCGCTACTAAAATACCGAGCCAGAAAGTTTCGCAAGAGAAAGGAACTGTCACGCAGAATCCAGCAGCACAAGAAAGGCCAGATACTAGTCATCTTCCTGCAGCCTTTGATGATGTCATCCATGTTATTCGCCATAGTAGTTATCGCGTTGGGAGTGATCAGCCGGTAATGGAATCGGTCGAAATGGGAGTTCAGAATGTCGACGTTGGCAAGTTTATCAATGTTATGAGGGACGACATAGAAAAGAGAAACATAAGCTCTCCAATGACTCTTAAATCTTCGAGTTCCTCCGAATCTGCAAGCTTGAAATCTAATATTTCTGATCAGTTGGAAATGAAAAACACAAACGCAAGTTTCTCTGACGCTACGAGCTTGAAACCGAGCATTTCAGATCATCCAAGTCTTAAGGAACAAGAAGTGAGCAACACTGTTTCTTCCGTTTCAGAATCTGATTCATCTGAGCTTAGTAAATGCAACACTCCTACAACCGAAGACAAACCACCGGCGAAGGAAATACTCGACGTGAAATCTTTCAGGCAGAGAGCTGAAGCACTTGAAGAGCTTTTGGAATTGTCTGCAGATTTGTTGCAGCAAAATAGACTAGAGGAACTTCAAGTTGTTCTAAAGCCATTCGGTAAAGATAAGGTCTCTCCACGAGAGACAGCGATTTGGTTAGCCAGGAGTCTTAAGGGAATGATGTCCGAGGAAAATGGAGGACGCTGTTCATCATGA 3063 0.4205 MESKMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAETMKKLNGTYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKILIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFAPQTAFSPEKPISAVKDTKRHMAESQNSTSSSSDKDSLMSNDRNIATTAPKCDSTATDMDIGDDGSENLQEVIKSSHNEQHSNVESKLQPRTIRNIMMALKEGRGREATSPMRGREATSPMRGSRVKTGGVSTPKVNTDVPSKLPKPTFIAPSLKPNLESPTVPLKASPDSSKRIYGSPHSKLQLLMTEPSPKVKPKQDTTPPSGSIKQQGEGDGVPPRPRQRTPPSLLRRPTFPGRMRLAGTDVPNAANDSGKLGPSNTGQESETSHCQLFNGSIPRISRPFIREPQNAFERSSKGMQTDSSNSASSSVSIQGCELADDATTFIDMREHILPDHDNETNVVGVESHPDRSSSTTCSHCKMAEEASEETCEVTMNFQSTISSNEKVSSNLTLDHPAENSKEMFASEYSHPRNQTTISTASVCDNRSVDPPAEAAEEIEDLRDVSKEMDLTKSPKHPPSISGENSVCEEVGSVNKLNNRPETVTGDDKFTVKERLSLVAETDPITTATKIPSQKVSQEKGTVTQNPAAQERPDTSHLPAAFDDVIHVIRHSSYRVGSDQPVMESVEMGVQNVDVGKFINVMRDDIEKRNISSPMTLKSSSSSESASLKSNISDQLEMKNTNASFSDATSLKPSISDHPSLKEQEVSNTVSSVSESDSSELSKCNTPTTEDKPPAKEILDVKSFRQRAEALEELLELSADLLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSEENGGRCSS 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 783 806 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 377 540 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 564 583 - -
Tsu06g01299 1020 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 297 314 - -
Tsu06g01299 1020 SUPERFAMILY Protein kinase-like (PK-like) 5 318 IPR011009 -
Tsu06g01299 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 783 803 - -
Tsu06g01299 1020 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1002 - -
Tsu06g01299 1020 CDD STKc_Nek 7 262 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 565 583 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 894 940 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 894 945 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 289 314 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 319 338 - -
Tsu06g01299 1020 Gene3D Transferase(Phosphotransferase) domain 1 90 332 - -
Tsu06g01299 1020 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 525 540 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 861 882 - -
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 467 481 - -
Tsu06g01299 1020 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1002 - -
Tsu06g01299 1020 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Tsu06g01299 1020 MobiDBLite consensus disorder prediction 863 882 - -
Tsu06g01299 1020 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Tsu06g01299 1020 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01299 Tsu-Chr6 12260024 12265030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01299 14 263 MAP Kinase Kinase Kinase AT1G53570 30.980 5.12e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Tsu06g01299 Pkinase 2.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01299 K08857 - gmx:100818747 1425.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01299 06 12260024 12265030 Tsu06g01299 06 12260024 12265030 ECH
Tsu02g04755 02 56683257 56688706 Tsu06g01299 06 12260024 12265030 PCT