Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g01295 | ATGGTAGCTATTAAGGTTAAAGTTCacatttttctcttattttcctTTATGATTACAATGTGTTATGGTGAAACCAATCCAAATGATGTCAAAATTCTGAATGATTTCAAGAAAGGGTTGAAGAATCCAGAGCTTCTAAAATGGCCTGATAAAGGTGATGATCCATGTGGTTCAGCTTCATGGAATTATGTGTACTGTTCTAAAGGTAGAGTTACTCAAATTCAAGCTAAGAATCTTGGTCTTATTGGTTCATTGCCTTCAAATTTTAATCAGCTTTCAGAGCTTCAAAATTTAGGTCTTCAAAGAAATAATCTTAGTGGAATGTTACCTAGTTTTAGTGGATTATCTAATTTGCAATATGCTTTTTTAGATTATAATGAATTTGATGGAATCCCTTTAGATTTCTTCAATGGATTGACCAACATTCAGGTTTTGTCTTTGGAAGAAAACCCTTTGTTGAATGCTACTAATGGTTGGTCATTCCCTATGGATTTGAAAAATTCAGCTCAATTAACAACTCTTTCGTTGGCGAGTTGTAATTTGGTTGGTACATTACCTGATTTTCTAGGCACATTGTCTTCATTATCAGAATTGAGGCTTTCAGGTAATAGAATTTCGGGTGAAATTCCGGTTAGTTTTGGTCAATCGTCGATACAGGTTCTATGGTTGAATGATCAACAAGGTGGTGGAATGACAGGTTCTATTGATGTTATTGCTTCAATGACATTTTTGAGACAGGTTTGGTTACACGGAAACAAGTTCACCGGAACAATTCCGTCGAATATTGGAAATCTCACTTCTCTGCAAGATCTTATCCTCAATAGTAATCAACTTGTTGGTTTGATTCCAAATTCATTAGCAAATTTGGAACTTAAAACACTTGATTTAAATAATAACATGTTCGTCGGTCCAATACCAAAGTTTAAGGCTGCAAAAGTATCTTATGATTCTAATTTCTTTTGTCAAACTAAACCTGGTCTTGAATGTGCTTCTGATGTTAATGTCTTGTTGGATTTTCTACATAATGTGAATTATCCATCAAATCTTATTACTAAATGGGTTGGTAATGATCCTTGTGAACAACCATGGTTTGGATTGAGATGCAATAACGCGAAGGAGGTATCGATGATTGCTTTGCCTAATCAAAAGCTTAGTGGTACTTTGAGTCCTTCACTTGCTAAGTTAGTTTCATTACTTCAAATTAAGCTTGCAGGAAACAATTTAAATGGCAAAGTTCCTAGTAATTTTACTGAATTGAAATCATTGACGTTGTTGGATTTGAGTAATAACAATTTTGAACCTCCGCTGCCAAATTTTCATGATGGTGTGAAAGTTATCACTGATGGTAACCCTCTTTTTGTTAATCAACCTAGAACGAGTCCCGTTCCTATTAGCAGTCCACCGCCTTTAAGGGATCCACCTTCACCACACATTGTGTCGCCGCCGCCGCTGCCGTCATCGCCATCGCCATTGCCATCCTCCGTTATTCCACATCCCTCTAGTCAAAGTTCAAGCTCTAATCAATCTAGGAATGTTGAATCAAAGGCTCAACCGAGTAACTCGCATAGATTCAAAACAGTACCTATAGTGTCTGGAGTTGCAGCGGCATTTGTAGCTCTTTTGGTTATTGGTCTCTTAATATGCTGTTGTTTGAAGAAGAAGCAAAAAGGTTCAATTGATGGTTTTAGTTCTGTTGTGTTTAAAACTCAAGATCCATCCGATCCAAACACAATGGTTAAATTTGCCGTGTCAGATAGCAACACTGGGAACTTATCGACAACGACAGGAACATGTTCTCTAACTAGTGGTGAAACCGGAAACTATCATGCAATTGACTCTGGTAACCTTGTCATCTCAGTTCAAGTTATACGCAAGGTGACAAATAACTTTGCTTCTGAAAATGAGCTCGGCCGTGGAGGATTTGGAACAGTTTACAAAGGTGAACTGGAAGATGGAACAAAAATAGCAGTGAAAAGAATGGAATGTGGAATTGTTAGCAGTAAAGGAATTGATGAGTTTCAAGCCGAAATAGATGTTCTTTCGAAGGTTCGGCACCGGCATTTGGTATCCCTTCTAGGCTATTCCATTGAAGGAAATGAGAGGCTTTTAGTTTACGAGTACATGCCTCTTGGCGCTTTAAGCAGACATCTTTTCCATTGGAAAAGCTTGAATTTGGACCCTTTGTCTTGGCCACATAGACTTGCAATAGCACTTGATGTTGCTAGAGGGATGGAATACCTTCACAGTCTTGCTCGACAGACCTTCATCCATCGAGATCTCAAGTCTTCGAATATCCTACTTGGAGATGATATTCGAGCCAAAGTTTCTGATTTTGGTTTGGTGAAACTTGCACCAGATGGTGAAAAGTCTATGGCTACAAGACTTGCTGGAACATTTGGATACCTTGCCCCTGAGTACGCcgTGATGGGGAAAATCACGACTAAAGTGGATGTGTTCAGCTACGGTGTGGTCTTGATGGAACTTCTGACCGGATTAATGGCTCTTGACGAGAACCGACCAGAGGAAAACCGATACTTAGCCGAATGGTTCTGGCAAATCAAATCAGACAAAGAAAAGCTTATGGCTGCCATCGATCCAGCACTTGAAGTAACCGAAGAGACTTTCGAGAGTATTTCCACTGTAGCTGAACTTGCCGGACATTGCACTGCTAGAGAAGCAAATCATAGGCCAGATATGGGACATGCAGTCAAGGTGCTGTCAGAATTAGTAGAGAAATGGAGACCGGTTGATGAAGAATTTGATTATAGCGGTGGCGTTGACTTCGGTCAACCGCTTCCGCAATTGTTGAAAATTTGGAAGGAAGCAGACAGCAAAGATGTGAGTTATACAAGTCTTGAAAATAGTAAAGGAAGTATACCAACTAAGCCTTCTGGTTTTGCAGAATCTTTTAACTCTAATGATGGTAGATGA | 2931 | 0.3879 | MVAIKVKVHIFLLFSFMITMCYGETNPNDVKILNDFKKGLKNPELLKWPDKGDDPCGSASWNYVYCSKGRVTQIQAKNLGLIGSLPSNFNQLSELQNLGLQRNNLSGMLPSFSGLSNLQYAFLDYNEFDGIPLDFFNGLTNIQVLSLEENPLLNATNGWSFPMDLKNSAQLTTLSLASCNLVGTLPDFLGTLSSLSELRLSGNRISGEIPVSFGQSSIQVLWLNDQQGGGMTGSIDVIASMTFLRQVWLHGNKFTGTIPSNIGNLTSLQDLILNSNQLVGLIPNSLANLELKTLDLNNNMFVGPIPKFKAAKVSYDSNFFCQTKPGLECASDVNVLLDFLHNVNYPSNLITKWVGNDPCEQPWFGLRCNNAKEVSMIALPNQKLSGTLSPSLAKLVSLLQIKLAGNNLNGKVPSNFTELKSLTLLDLSNNNFEPPLPNFHDGVKVITDGNPLFVNQPRTSPVPISSPPPLRDPPSPHIVSPPPLPSSPSPLPSSVIPHPSSQSSSSNQSRNVESKAQPSNSHRFKTVPIVSGVAAAFVALLVIGLLICCCLKKKQKGSIDGFSSVVFKTQDPSDPNTMVKFAVSDSNTGNLSTTTGTCSLTSGETGNYHAIDSGNLVISVQVIRKVTNNFASENELGRGGFGTVYKGELEDGTKIAVKRMECGIVSSKGIDEFQAEIDVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSRHLFHWKSLNLDPLSWPHRLAIALDVARGMEYLHSLARQTFIHRDLKSSNILLGDDIRAKVSDFGLVKLAPDGEKSMATRLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDENRPEENRYLAEWFWQIKSDKEKLMAAIDPALEVTEETFESISTVAELAGHCTAREANHRPDMGHAVKVLSELVEKWRPVDEEFDYSGGVDFGQPLPQLLKIWKEADSKDVSYTSLENSKGSIPTKPSGFAESFNSNDGR | 976 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g01295 | 976 | PANTHER | OSJNBA0070M12.3 PROTEIN | 5 | 976 | - | - | |
Tsu06g01295 | 976 | Gene3D | Transferase(Phosphotransferase) domain 1 | 708 | 922 | - | - | |
Tsu06g01295 | 976 | ProSiteProfiles | Protein kinase domain profile. | 630 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g01295 | 976 | MobiDBLite | consensus disorder prediction | 461 | 495 | - | - | |
Tsu06g01295 | 976 | Gene3D | Ribonuclease Inhibitor | 331 | 456 | IPR032675 | - | |
Tsu06g01295 | 976 | Gene3D | Ribonuclease Inhibitor | 26 | 326 | IPR032675 | - | |
Tsu06g01295 | 976 | SMART | serkin_6 | 630 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g01295 | 976 | MobiDBLite | consensus disorder prediction | 450 | 521 | - | - | |
Tsu06g01295 | 976 | MobiDBLite | consensus disorder prediction | 496 | 521 | - | - | |
Tsu06g01295 | 976 | Gene3D | Phosphorylase Kinase; domain 1 | 593 | 707 | - | - | |
Tsu06g01295 | 976 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 755 | 767 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu06g01295 | 976 | ProSitePatterns | Protein kinases ATP-binding region signature. | 636 | 658 | IPR017441 | GO:0005524 | |
Tsu06g01295 | 976 | PANTHER | OSJNBA0070M12.3 PROTEIN | 5 | 976 | - | - | |
Tsu06g01295 | 976 | SUPERFAMILY | L domain-like | 330 | 439 | - | - | |
Tsu06g01295 | 976 | SUPERFAMILY | Protein kinase-like (PK-like) | 611 | 906 | IPR011009 | - | |
Tsu06g01295 | 976 | SUPERFAMILY | L domain-like | 25 | 308 | - | - | |
Tsu06g01295 | 976 | SMART | LRR_typ_2 | 115 | 138 | IPR003591 | - | |
Tsu06g01295 | 976 | SMART | LRR_typ_2 | 92 | 114 | IPR003591 | - | |
Tsu06g01295 | 976 | SMART | LRR_typ_2 | 265 | 288 | IPR003591 | - | |
Tsu06g01295 | 976 | SMART | LRR_typ_2 | 419 | 441 | IPR003591 | - | |
Tsu06g01295 | 976 | SMART | LRR_typ_2 | 192 | 216 | IPR003591 | - | |
Tsu06g01295 | 976 | Pfam | Protein tyrosine and serine/threonine kinase | 633 | 904 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu06g01295 | 976 | MobiDBLite | consensus disorder prediction | 952 | 976 | - | - | |
Tsu06g01295 | 976 | CDD | STKc_IRAK | 636 | 909 | - | - | |
Tsu06g01295 | 976 | Pfam | Leucine rich repeat N-terminal domain | 330 | 369 | IPR013210 | - | |
Tsu06g01295 | 976 | Pfam | Leucine rich repeat N-terminal domain | 27 | 67 | IPR013210 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g01295 | Tsu-Chr6 | 12232590 | 12236607 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g01295 | 83 | 909 | Receptor kinase-like Gene Family | AT1G55610 | 29.566 | 7.14e-83 | 290 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Tsu06g01295 | PK_Tyr_Ser-Thr | 1.4e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g01295 | - | - | cam:101505581 | 1477.23 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu06g01295 | 06 | 12232590 | 12236607 | Tsu06g01295 | 06 | 12232590 | 12236607 | ECH |