Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01273 ATGGGTGTCTCAGGGAAATGGATTAGAGCATTAGTTGGTCTAAAGAAATCAGAAAAGACTGGGTCCTCAGAGAAGGATGGGAATAAGGATAGCAAGTCTCGCCATCGGAGAAAGCATTCCATCGAAATTGACAATAGCAAACTTCAAAATgagcttgatgatgttgaagctACACCTATTGGAGATGCAGATCATGCAATTCCCCAATCAAACCTTGATGCTCATTATTCTCCTTCTACTTCACAACAAGCACATGATACTGGACATAATCATCAAATATCAAGAGAAGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTTCGCTTGTCATTGGAAAGTCAAACAGAACAACAGAAACTTCAGCAACAGCTTGTAAATGAAGCTCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTCGGATCTGTTGAAGAAATTCAATCCAAAATATTAAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCGCATCAGTGGCAGGCAGGGTCGAGGCAGCAGGCTGTTTCTTCAGGGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCTTGGGAGAATCGTTTTCTTGACATAAACACGAAAGACGGAGGAAAGGTAGACGAAGATGATGTTATGGACAGTAGAAATGGAATCAGACCCCAGTTCAGGTCTAATAACGCGAAATCAATTCCTCCAAATATTCATCCAAGTGTTGTCGGTCATAAAACTGGTCCCTCTGTCTCTGATGGCTGTGATTCTTCTTCCACTAGCAAGTCAGCAGGTTTACTCGAGACATCGAACACACAATCTGTTAAACCAAAATCTAATACAAATGTTCAAAATCCcgttgaagaaaccaactcaaAACCTGGATTTCCAAGATCTCAAAGTAATCCAAAGGAGAGAAAGTCACAGGTAGATAAACAGGCGAAAAAGCGATTATCACTTCCTAACAATGGGGTTGGTTCCGGGGCTCAAACGGCCAAATATCCTACCAGATCTAACGTGAAAGGGACACGTAGCACGCAAAAGCCTATAAGGGATAAGCCTAAGCCTAAGCTCAATGGAGGCGAGGATGCGAGTCTTGCTAAATCTGTTCCACAGCCCACGGTCGTGTAA 1326 0.4268 MGVSGKWIRALVGLKKSEKTGSSEKDGNKDSKSRHRRKHSIEIDNSKLQNELDDVEATPIGDADHAIPQSNLDAHYSPSTSQQAHDTGHNHQISREEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLSLESQTEQQKLQQQLVNEARVREIEEGWCDSVGSVEEIQSKILKRQEAAAKRERAMAYALAHQWQAGSRQQAVSSGFEPDKSSWGWNWLERWMAVRPWENRFLDINTKDGGKVDEDDVMDSRNGIRPQFRSNNAKSIPPNIHPSVVGHKTGPSVSDGCDSSSTSKSAGLLETSNTQSVKPKSNTNVQNPVEETNSKPGFPRSQSNPKERKSQVDKQAKKRLSLPNNGVGSGAQTAKYPTRSNVKGTRSTQKPIRDKPKPKLNGGEDASLAKSVPQPTVV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01273 441 MobiDBLite consensus disorder prediction 72 88 - -
Tsu06g01273 441 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Tsu06g01273 441 MobiDBLite consensus disorder prediction 316 368 - -
Tsu06g01273 441 MobiDBLite consensus disorder prediction 388 410 - -
Tsu06g01273 441 MobiDBLite consensus disorder prediction 287 301 - -
Tsu06g01273 441 MobiDBLite consensus disorder prediction 18 48 - -
Tsu06g01273 441 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Tsu06g01273 441 MobiDBLite consensus disorder prediction 267 441 - -
Tsu06g01273 441 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Tsu06g01273 441 Gene3D - 97 138 - -
Tsu06g01273 441 PANTHER IQ-DOMAIN 5-RELATED 2 401 - -
Tsu06g01273 441 MobiDBLite consensus disorder prediction 61 91 - -
Tsu06g01273 441 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Tsu06g01273 441 MobiDBLite consensus disorder prediction 14 48 - -
Tsu06g01273 441 MobiDBLite consensus disorder prediction 267 285 - -
Tsu06g01273 441 SMART iq_5 95 117 IPR000048 GO:0005515
Tsu06g01273 441 SMART iq_5 118 139 IPR000048 GO:0005515
Tsu06g01273 441 Coils Coil 38 58 - -
Tsu06g01273 441 PANTHER IQ-DOMAIN 5-RELATED 2 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01273 Tsu-Chr6 11959600 11967624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01273 1 418 IQD Protein Family AT3G22190 54.353 5.46e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01273 - - lang:109325503 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01273 06 11959600 11967624 Tsu06g01273 06 11959600 11967624 ECH