Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01264 ATGACAGTTATAATAAGAAGAAACGTGCTTTTTCTCATAAGCACTTATTCAACTCATTTCAGCACTATTTCTCATTACAGAAAACAAATTTCACTTGCTAATCTCTTCCAAACCTACGGTTTCCCTTCTTCAACCCTCCACAATTTCCTCTCCAAAAATCACAATTTCCTCTTCAATTCCGATCCATCCGAGCTTCGCAAATCGTTAACAACCCTCTTTTCCTTCCAAATTCCACAGAAAACCCTAATTTCCCTTCTTCACGATTGCCCTTCTGTGTTAGAATCTCAATTTCTTCATAATTGGGAATTAGCTTTTCCCCAATTCAAATCCAAAGTTTCTAATCCTTCCCCGTCGATGATCGCGAATTTGTTGCGATGCTCTAGAACGTTCCAATTAAATCCCCTTGAAATTTCTGAAAAAGTTGTGATTTTTAGGGGTTTAGGGTTTTCTGATGATGTTGTAGCTAGGGTTTTGGAAGAATTTCCTAGTGCGGTTGTAATGAGTGAAAGTCAAATTGTTGCTGTGATTGATTTTCTTGTGGAATTTGGTGTTTCTAGAGATGAAATTGATAGAGTTGTTAGATTGTATCCTAGGGTTTTGGAATTTGGAGTTGAAAATAGGTTGAAGCCGTTGATTCACGAGTTGAGGGGTTTAGGGTTTTTGCGTCGTGAAGTTAGGGCGGAAGTTGTTAGGGATCCGAGGATTCTGGGAATGGAAATTGGGGAATTTTCGCGGTGTTTGAAGTTGTTGCAGAGTTTGAAATGTAGGGAGGCAATTAAAGAGAGGATTTTTGGAGAGGGTTTGGTTAGGGCTTGTTTTGAAGTGAAGCTGAGAGTCGATTGTTTATGCAGTCACGGTTTGATTCGTAGGGATGCTTTGAAGGTATTGTGGAAGGAACCAAGGTTGATGACTTATGATTTGGAGGATATTGAGAAGAAGATTGAGTTTTTAGTTCATAGGATGAAATATGGTATTGATTGTTTGCATGAAGTTCCTGAATACTTGGGTGTGAATTTTGAAAAGCAGATTGTTCCTAGATACAATGTGATCGAGTATTTGAATGGAAAGGGTGCAATTGGGTTTGAAGTTAGATTGAAGGACCTTATCAAACCAACTAGGCTTAGATTTTATAACCTTTATGTCAAGCCTTACCCTGAATGTGAAAAACTATATGGCAGATTTTCAGGTAAGGTTGAAATTAAAAGAAACCATCCTGCTGGACTTTGGAAGCTGTTCAAACCACAAAATGGTTTGATCTTTggattcaaatataaatttaagCTGAGTGAGCTGTTGAGACATGCATCTTTGCAGTCAGTTGCAGACCTTTTAAGCAATCTGCGTAGCATGATCAAATTTCAAGTATATTTGAATTATTGCATTCTGATCTTCATGAGGAGAGGGCTACAGCTGCTCTTTAGTACATGTCCTCCATGGTCCAAACACAGAAATGGACGAGTTAGAGCAACGAGTGAAAAGTTTAAAGTTGAAGCCGAAGGAATCAGCTTTTCTTCTATTTCAGCAGAAGATGGAACAACCGTTGCAGGCTTACTGCCAAAGCTATCAGAGAAGGAGCAAATTGATAGGGCAAAGGTAGTGCTTCCTTTTGAACACCAAGGAAATGGTAAACCGATCCAAATTTATGATGGTAGGAGATCCCTTGATGAGAGTAGCAGTGAGGGGGCACCTATCTCAAGAGGTAAAAACGAGGATTCAGCCCTAGGTGAGATTATATATTTTCGCGATTCAGATGATGAGATGCCAGATTTTGATGAAGACCCAGATGATGATTTAGATATATGA 1803 0.3871 MTVIIRRNVLFLISTYSTHFSTISHYRKQISLANLFQTYGFPSSTLHNFLSKNHNFLFNSDPSELRKSLTTLFSFQIPQKTLISLLHDCPSVLESQFLHNWELAFPQFKSKVSNPSPSMIANLLRCSRTFQLNPLEISEKVVIFRGLGFSDDVVARVLEEFPSAVVMSESQIVAVIDFLVEFGVSRDEIDRVVRLYPRVLEFGVENRLKPLIHELRGLGFLRREVRAEVVRDPRILGMEIGEFSRCLKLLQSLKCREAIKERIFGEGLVRACFEVKLRVDCLCSHGLIRRDALKVLWKEPRLMTYDLEDIEKKIEFLVHRMKYGIDCLHEVPEYLGVNFEKQIVPRYNVIEYLNGKGAIGFEVRLKDLIKPTRLRFYNLYVKPYPECEKLYGRFSGKVEIKRNHPAGLWKLFKPQNGLIFGFKYKFKLSELLRHASLQSVADLLSNLRSMIKFQVYLNYCILIFMRRGLQLLFSTCPPWSKHRNGRVRATSEKFKVEAEGISFSSISAEDGTTVAGLLPKLSEKEQIDRAKVVLPFEHQGNGKPIQIYDGRRSLDESSSEGAPISRGKNEDSALGEIIYFRDSDDEMPDFDEDPDDDLDI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01264 600 MobiDBLite consensus disorder prediction 543 600 - -
Tsu06g01264 600 MobiDBLite consensus disorder prediction 585 600 - -
Tsu06g01264 600 Pfam mTERF 278 371 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 Pfam mTERF 63 246 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 44 417 - -
Tsu06g01264 600 SMART mt_12 155 185 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 SMART mt_12 226 256 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 SMART mt_12 120 150 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 SMART mt_12 325 356 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 PANTHER CGI-12 PROTEIN-RELATED 44 417 IPR003690 GO:0003690|GO:0006355
Tsu06g01264 600 Gene3D Transcription termination factor 3, mitochondrial 168 394 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01264 Tsu-Chr6 11870323 11874964 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu06g01264 mTERF 3.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01264 - - cam:101513737 698.353