Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01263 ATGTCTTGTACATCAATAACAATActtgttttccttttcttcacTTTCATATACCTTTTATTCAAACTATTCTTacatccaaaacaaaaaactaatcCACCAGGTCCACCGGCGCTACCAATAATCGGAAACCTTCACATATTAGGCAAACTTCCACATCGAAAACTTCAATCACTCTCCAAAAAATATGGTCCAATTATGTCCTTTCAACTAGGTCAAGTCCCGGCTATTGTCATTTCATCTTCAAAAGTTGCCGAGTCATTTCTCATAACCAACGACATTGTTTTCGCAAACCGACCAAATATTATTGGAGCGGAGATCATGTCTTATGGTTGCAAAGGGATGTCATTTTCTAAGTATGGTCCTTATTGGCGTAGTGTCCGAAAACTTTGCGCTTCGAAACTTCTTAGTCCTTCAAAAGTTGAGATGTTTGGTCCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTAAGTCATTGGAAAAAAGTAGTTTGGTTAGTGAGGTTGTGAATGTTAGTGAAGTTGTAGAAAACCTTATAGAGGATATTGTGTATAAGATGGTGTTGAGTAGGAGTAAGTATGATCAATTTGACTTAAAGAGGTTGGTTCAAGAAGTAATGACTTTGGTTGGATCTTTTAACTTGGCTGATTATGTTCCATGGCTAGGTGCATTTGATCTTCAGGGATTAACACGAGCCTGCAAGAAAACTAGTAAAGCACTTGATGAGGTGTTGGAGACAATAATAAGAGAGCATGAACAAATTAATGTAGACAAAACTAGTCATGAAGATTTTGTAGACATACTTCTCACTTTTATGCACCAAAACATTGATCATGGGAGTGAACAAAATCACAACATTGATAGAACTAACATCAAAGCTATTTTACTAGATATGATTGTGGCATCAATTGTTACATCTGCCGCCACAATTGAATGGGCTTTATCTGAACTTTTAAGGCATCCAAGAGTGATGAAAAAGCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAGAGAATGGTTGAAGAGAAGGATTTGAAGAAATTGAATTACTTAGATAAGGTGGTAGATGAAACTTTACGACTTCATCCTGTTTCACCTTTATTACTCCCTCGTGAATGTAGAGAGAGCATAACAGTTGATGGTTATTTTATAAAGGAAAAGACACGAGTTATAGTGAATGCATTGATAATAGGGAGGGATCCTGATATTTGGTCAGAAAATGCCGAAAAATTTTATCCAGAGAgatttattaacaaaaaaatgaattatgaaGGACACCAATTTGAAAGTATACCATTTGGATTTGGTCGTAGGCGTTGTCCTGGAATTCAATTGGGTTTGACGACTGTTAGGTTTGTTTTAGCTCAATTGGTGCATTGCTTTAATTGGAAACTACCCTATAATATCAGTCCTTCCAATTTAAACATGGAGGAGAAATTTGGTCAATCTATACATAGAGCTCAACACTTGCATGCAATACCAATTTATCGTTTGGAAGGTGATCCCAAGCTTGGATAG 1521 0.3491 MSCTSITILVFLFFTFIYLLFKLFLHPKQKTNPPGPPALPIIGNLHILGKLPHRKLQSLSKKYGPIMSFQLGQVPAIVISSSKVAESFLITNDIVFANRPNIIGAEIMSYGCKGMSFSKYGPYWRSVRKLCASKLLSPSKVEMFGPIRKEKLDVLVKSLEKSSLVSEVVNVSEVVENLIEDIVYKMVLSRSKYDQFDLKRLVQEVMTLVGSFNLADYVPWLGAFDLQGLTRACKKTSKALDEVLETIIREHEQINVDKTSHEDFVDILLTFMHQNIDHGSEQNHNIDRTNIKAILLDMIVASIVTSAATIEWALSELLRHPRVMKKLQDEIQNEVGNKRMVEEKDLKKLNYLDKVVDETLRLHPVSPLLLPRECRESITVDGYFIKEKTRVIVNALIIGRDPDIWSENAEKFYPERFINKKMNYEGHQFESIPFGFGRRRCPGIQLGLTTVRFVLAQLVHCFNWKLPYNISPSNLNMEEKFGQSIHRAQHLHAIPIYRLEGDPKLG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01263 506 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Tsu06g01263 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 499 - -
Tsu06g01263 506 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 499 - -
Tsu06g01263 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01263 506 Coils Coil 324 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01263 Tsu-Chr6 11861549 11864601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01263 28 494 Cytochrome P450 AT3G48310 40.385 3.92e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01263 - - mtr:MTR_5g470730 605.52