Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01203 ATGTCTGAGTTTGACACAAACATCCCAACAACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGACAAAAGAATATGTTCATGTCCGTGTACAGCAGCGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTACAGCTATAGCAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAGGCGGGCATCGTAAAAAAGGAGAATATCAAGATTCATGGTTTCTAA 342 0.4327 MSEFDTNIPTTFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01203 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Tsu06g01203 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Tsu06g01203 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Tsu06g01203 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Tsu06g01203 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
Tsu06g01203 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Tsu06g01203 113 Gene3D - 2 113 - -
Tsu06g01203 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Tsu06g01203 113 MobiDBLite consensus disorder prediction 1 23 - -
Tsu06g01203 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01203 Tsu-Chr6 11132477 11136221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01203 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 1.08e-75 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01203 K03113 - gmx:100784390 223.787