Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01193 ATGAAAATGGGAAGCCAAAGTTGGttgaatgttttgattatttGTCTTATAGCAATAATTGGAGCAACTCATGCTGAGTTGCAACTGGGTTTCTATGCTAAAAGCTGCCCAAAAGctgaaaaaattgttttgaagtATGTTCATGAACATATTCCAAATGCACCATCACTAGCAGCTGCACTCATAAGACTACATTTCCATGATTGTTTTGTTAGGGGATGTGATGCATCTGTTCTTCTTAACGCAACACAAGACAACCCTCAAGCCGAAAAGACCTCTTTTCCAAATCTTTCGCTTAGAGGCTTTGCATTCATTGACAAAATAAAGAGCCTTATTGAAGCTGAATGTCCCGGTGTTGTCTCATGTGCTGATATAGTGACTTTGACTGCTAGAGACTCTATTCATGCCATTGGTGGACCTTATTGGAATGTACCAACTGGTCGAAGGGATGGTCTCATATCTAAAGCAGCAGATGTTTTTCTTGGCCTTCCAGCTCCATTTCACAACCTCACCACTCTCCTAACACTCTTTGGCAATGTTGGACTTGATGCAACTGATTTGGTCTTGCTTTCTGGTGCACACACAATTGGTATTGGACATTGTGCATCAGTATCAAACAGGTTGTATAATTTTACTGGCAAGGGTGATCAAGACCCAGATCTGGACAGTAAATATGCTAAAACTTTGAAAACCTTTAAGTGTAAGAGTATCAATGATCAAACCACAGCTCTCGAAATGGACCCTGGAAGTCGCAATACATTCGATCTTGGCTATTACAAGCAAGTAGTTAAGAGAAGGGGGTTGTTTCAATCTGATGTTGCATTGCTTAAAAGCTCTACAACAAGATCTATTGTTGCACAACAGCTTCAATCACCTGAAAAATTCTTTGTTGAATTTGCCAAGTCTATGGAGAAAATGGGAAGAATTAATGTCAAGATTGGAACTGAAGGAGAGATTAGGAAGCATTGTGCatttgttaattaa 984 0.3831 MKMGSQSWLNVLIICLIAIIGATHAELQLGFYAKSCPKAEKIVLKYVHEHIPNAPSLAAALIRLHFHDCFVRGCDASVLLNATQDNPQAEKTSFPNLSLRGFAFIDKIKSLIEAECPGVVSCADIVTLTARDSIHAIGGPYWNVPTGRRDGLISKAADVFLGLPAPFHNLTTLLTLFGNVGLDATDLVLLSGAHTIGIGHCASVSNRLYNFTGKGDQDPDLDSKYAKTLKTFKCKSINDQTTALEMDPGSRNTFDLGYYKQVVKRRGLFQSDVALLKSSTTRSIVAQQLQSPEKFFVEFAKSMEKMGRINVKIGTEGEIRKHCAFVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01193 327 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Tsu06g01193 327 PANTHER PEROXIDASE 6 326 - -
Tsu06g01193 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Tsu06g01193 327 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PANTHER PEROXIDASE 25-RELATED 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tsu06g01193 327 Gene3D Peroxidase, domain 2 164 306 - -
Tsu06g01193 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 Gene3D - 30 327 - -
Tsu06g01193 327 ProSiteProfiles Plant heme peroxidase family profile. 26 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01193 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01193 Tsu-Chr6 11062520 11064686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01193 11 327 Peroxidase AT4G11290 62.579 2.66e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01193 K00430 - gmx:100785662 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01193 06 11062520 11064686 Tsu06g01193 06 11062520 11064686 ECH
Tsu02g04831 02 57510059 57512296 Tsu06g01193 06 11062520 11064686 PCT