Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01191 ATGTTTGAACGGAAGCAATTCAAGACAAGGTTATGCGCACTCTATCAGAATGGTCGTTGCAATCGCCATAACTGTTCCTTTGCACATGGAAATGCTGAGCTTCGACGTTTTTCTTCCTCCTTTAATGGAAGGAGAGACTATTTAGGTAATGACTTGAGGGATAAACTTGAGAGAAGGCATTTATCACCTCCAAGATATTCACCTCCAAGATATTCACCGGCTCGAGATGCAAGACCTCGGCAGACCACTCGCGAATATAGTCCACCGAGGTCTCCGGAGAAAAGAAGTGACAGAAGATATAAGAGAAAACAGGGCATTAGTGGCCAAAGCGATATTTCTGGAAGTTTAAAAGTCTCTGATAGAATTAATGATCAAGTTAAAGAAGGAAAATTGCATTCCTCTGATTCTAGAAATACTCTTGAGGATCAGCTGAAGAAAGTACATTCTGATATCAACACTCTTGAGAACCGGAAATCCCAACTATCGGTCCGTCTAGATGAGAGTGTTCAAGAAGTGGATATCCTTAATTCCAGAATTCAGGAACTTGAGGTTCAGTTAAACAAGGAGAATGGGGAGTGTAAAAGAATTACTTCAAGAATAAGGAAGTTTGTTCGAATGCACAATCATAATTTGGAGTTGCAAGATGAACTTAAGAGATCACAGGTCCGACTTCAAAGGTTTGGAGATCAGCTTTTCTCGGACATTTCTATAATTGGTGCTAATGAGGAAGATTTAAGCGTTGATATTGTAAGCAATGATAAATCAAAAGTGGGGAATTTGCTTGAAACAGAAAGAAGCGGGAAGCGTTCTCGGTGGAATTTGTCTGCTCAAATGAGTGACAAGGGTTGTGAGGAGGCCCCAGGCAATGGACTTGAAGTTACTAGACACCTAGATCTTGAAGGAAAGCACAAGAAAGGCATATGGAATTCTTCTAACAACACTCATTCAGAAAAGCCGAAGGAATCCAGGATTGAAGTGCCATCAACCAGCATGGCAGCTCATGTGTTTGATGAGGAAGTTGATATTGAACATGATAACGGAACTGATATCGACGAAACTGCAAAGACAGAAAATGAGAATGCAGTGGCATTCCAGGTGAAGGGCATACCTCTCATGCTTACCCCAGATTTGATTCCCCGTAGCAATTATTCACAGTATGAGGGTAAACACGAGAACGTGGATGTGGATGGTCTTGATGAAGAGGCAGCAGGATCACGCGTGGACATGGTCTAA 1233 0.4185 MFERKQFKTRLCALYQNGRCNRHNCSFAHGNAELRRFSSSFNGRRDYLGNDLRDKLERRHLSPPRYSPPRYSPARDARPRQTTREYSPPRSPEKRSDRRYKRKQGISGQSDISGSLKVSDRINDQVKEGKLHSSDSRNTLEDQLKKVHSDINTLENRKSQLSVRLDESVQEVDILNSRIQELEVQLNKENGECKRITSRIRKFVRMHNHNLELQDELKRSQVRLQRFGDQLFSDISIIGANEEDLSVDIVSNDKSKVGNLLETERSGKRSRWNLSAQMSDKGCEEAPGNGLEVTRHLDLEGKHKKGIWNSSNNTHSEKPKESRIEVPSTSMAAHVFDEEVDIEHDNGTDIDETAKTENENAVAFQVKGIPLMLTPDLIPRSNYSQYEGKHENVDVDGLDEEAAGSRVDMV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01191 410 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Tsu06g01191 410 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 403 IPR045868 GO:0046872
Tsu06g01191 410 MobiDBLite consensus disorder prediction 106 120 - -
Tsu06g01191 410 MobiDBLite consensus disorder prediction 54 120 - -
Tsu06g01191 410 MobiDBLite consensus disorder prediction 77 105 - -
Tsu06g01191 410 Coils Coil 137 199 - -
Tsu06g01191 410 Gene3D - 1 36 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tsu06g01191 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01191 - - aprc:113858008 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01191 06 11025107 11033227 Tsu06g01191 06 11025107 11033227 ECH