Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01183 ATGGGTGATGGTGGCGTGGCGTGCATGCCTttgcagcagcagcagcaacagcAACATGTTAATGAGAAGTTACCGAATGCTGGGGAGGAAGCGGGTTGTGAAGGGAAGAGTGAGAATGGTTTTAGTTCTGAGGTGGTTAAAGCTCCTGAAAAGAAGAAGGTAAGGAAGGTGATAAAGAAAGTGGTGAAAAAAGTGAGGAAGAAAGTAGTGGCTGGAACGAAGAAGGCTGTAACTGTGAAAGGAGAATTGGTGTCGGATAGAGTGAGCAGCAATGGTGTTGAGAGTGGCGAAATATGTGGCGGGCAGAAGGAAGAAGTGGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCGGGGAGTGAACTGGAGAATGGAGAGTTTGTGTCTGAGAAGTTGCCACCGCCGCCTCCGCCACTACTACCACCACCGCGGAGTAATGAAATTGAGAACGGGGATATTGTCAGTGAGAGGTGGAAAAAAGTGCAGGTGGAGAAGGGAGAGGTTGATAATTGGAGAAAAGAGGAGATAGTTTCTGAGAAGAGCTGGAAAGGAGAAGGTGAGAAAGGGGCATATGCGTCATGGAGAGGTGGTATAAAGGGTGATGTTGAGAAGGGAGAATTCATTCCAGATAGGTGGCATAGGGGAGACACGGGGAAGGATGATTATGGGTACGGTAGAATCAACAGGTACGAGTCATATAGGGACAAAGGGTGGAAAACTGAACGTGACATGGAATGCACATCGTCTTCTGTCAGGTATGCAAGTAATGATTATTTTAGGAAGAAGGATTTTAATAGAAGTGGGAGTCAACATGTGAAAAGTGCACCCAGGTGGGAGAGTGGACAGGAAAGAAATGTAAGGATCAGTTCAAAGATTGTGGATGAGGAGAAATATGACGACAATGGTAGGATACATGCACGAGAGTACACTTCTGGAAGTCGTTTGAAGAGGCATGGGGATGATTCAGATGGTTGGGAGCGGAAGCAGTATGGAGATTATGCTGCTTTCAAAAGTCGAAGGGTATCTGATGATGGCTCACGCCATGTTTATTCAGAGCACCGTGTTTCTTCAGAGCACTATTCTCGTCTTCCTGCGGAGAGATCTTACAGAAATAGTTCTTCAAAGTTATCTGCCGACAAATATTCTTCTAGGCATCACGAATCTTTGTCTACCAGGTTGGCTTATGATAAACATGGATGCAGTCCTGGTCATTCTGAACGATCCCCACACGATCGAGCTAGATATTATGATAATAAAGATCACGCTCCTGCCCATCGCCATGAGAAGTCACCCTATGGCCGTGATAGATCACCATATAGCCGTGAGAAATATCCGCATGGTCGTGAAAGATCCCCATGTGATAGGAATTGGGATAGAAGCCGTCACCGTGATCATAAATTAAGAAGTCCTACTCATGCTGAGCGGTCCCCACAAAGTCGAGGCCGGCAACGTGGTTGCAGGGATCCGACTCCAAACTTGATAGAGCAATCCCCACTTGATCgaacaagagaaaatattgatcGAGAAACGAGTAATAAACCCTTATCAAGTGAAAAACATAACTCACAATATAGCTGTAAAAATCCTGAAAACAAGAATATTCAAAAGGAGTCAAATCTTCCAGGTATAGAATCTCAAGGTGAAAGAAACGTACATGATGCCAATGGGTCTGTTGAGAAAGGTGTCTGTAATGAACCTGAGAAGGAACAAAAGTCCTGCAGCCCAGCTGTAAACTGCAAAGATTCTCCTTGCTTGCAGCTACCTCCTGAGGAGCAGCCTTTTATGGAAGATATGGAAGAAGATATGGACATATGTGATACTCCTCCACATGTTCCTGTGGTTGCTGATTCATCAATAGGAAAATGGTTTTATCTGGATTATTATGGTGTAGAACACGGTCCATCTAAATTGTCTGACATCAAGGTtcttgttgatgatggtgtACTATTGCCGGATCATTTTATTAAGCACATAGATAGTGACAGGTGGTTAACTGTTGAGAATGCGGCATCACCATTGGCAGCTCAGAGTTTTCCTTTGATTGTGTCAGACACCATAACCCAGCTTGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGTCAGATACAGGTGATATTCTTCAAACTGGACCTGAAAATTATCTGGAATGGCAATCCCCATCCCTACAGTCAAAGTTATGCCCTGATGACAGTGTGCTTGCACCTCAGATGTTGGAGGACAGCCATTTTGATGAAAGGGTTGGTGTTCTGTTAGAAGGTTATGATATCATTCCTGGAAAGGAGCTTGAGGCAATAACAGAAGCTTTGCAAATGAATTTTGAATATGCAGAGTGGGACGATTTGGGAGACTACAAAGGTTTTCCGGGGCCTGATACTTGCCCGAACATGGACCATGattctaaaattgattttgcatCAAGTGAGCATGAGTCCCAGTTAATTATGCCCTCTGACAAGGATATTGGCTTTACCCTTGGTGTTCCTGATGACTGGTTTTCTGCTCGTTGGTCATGCAAAGGCGGTGACTGGAAGAGGAATGATGACTCCCAAGATAGATATTGTAAAAAGAAACTGGTCCTAAATGATGGGTTTCCATTATGCCAAATGCCTAAGTCTGGATGTGAAGATCCTCGGTGGTCTAGTAAAGACGACTTGTATTATCCATCTTACAGCAGGAAGCTTGACATCCCTCTTTGGGCTTTTTGTACAGATGAGTCGGTTGATTGCACTGGTGCTGTAAGCAGAGCAATTCAAAGTAAGTTTGGTTCTGTTAGAGGAGTGAAAGGAAATGTTCATTCAGTGGTCAGGATAAATTCATGTGTGGTCAAAGACCAGGGATCGTTGGTTTCTGAGTCACATCACAAGACCCAAGGCAAGGATAGATATCGTTCAAGGTCAGCCCGTCCTTGCTCTTCAACCAGTGATAGCAAGAAATCATCAGCTGAAGAGGATTCCCAGTCAAAAACTGTTAATGATCAAGGTTCTCAAGGCTATTGCAGGAGTGAAGAATTAGTTAATACTTCTCAAGACCATCTCTGTGCCGTCAATGACTTGCAGTTGCATTTGGGTGACTGGTATTATCTTGATGGTTCGGGGCGCGAAAGAGGGCCTTCATCGTTTTCAGATCTACAGTCTTTAGTAGACCAGGGAATTATAAAGAAGTATAGCAGTGTATTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACTTCTTCCACAGAAACTTACAATGTTAATCTCAAGAGCCACCAAGAAAGCAGTTCAGTGTCTGGTGAATTTTCAGGACATCGATCAGTGAAATCTCAAGGTGTTTCATTTGGTGAACCTCATTCAAAGTCAAATATGTTTAACAGCTTATACCCTCAGTTTGTTGGTTATACTCGCGGAAAACTACATGAATTGGTAATTAAATCATACAAGAGCCGGGAATTTGCCGCAGTAATAAATGAGGTTTTAGATCCTTGGATCAATGCAAGACAGCCAAAAAAGGAAATTGAGAAACAAATATATTGGAAATCAgAAGGTGATGCACATGCTTCCAAAAGGGCTCGAGTGCTGCTTGATGAtagtgaagaagaaagtgaTTTTGTAGATGACAGCTTTATTATTGAGAATGACAAATCCACTCTTGAAGCGCTGTCTGGTGATGTTACTTTCTCTACAGAAGAAAGTGGCATTAATGTTTCCAAGGAGGGAGGATGGGGCTTATTGGATGGTCGAATGTTGGCACGAGTCTTCCACTTCTTGAGGTCTGATTTGAAGTCCCTCGTCTTTGCTTCCATGGCATGCAAGCATTGGAAAGCGTCTGTAAACTTTTATAAAGAAGTCTCGAGAAATATCAACTTGTCATCCCTCAGTCATTCTTGCACGGATTCCATACTGTGGAACATTGTGAATACTTACGAGAAAGACAAGATCAAATCTATGATTCTAATGGGTTGCACCAATATTACTGCTGACATGCTAGAGAAAATTCTTCTTTCAGTTTCTGGTTTATCTACAGTAGACATTAGAGGGTGCAATCAGTTTGAGGAACTGACTCCTAAATTTACCAATTTGAAATGGATCAAGAGCCGAAATTCACGCATAACTAAAACTGCAGATGACCCACATAAAATCAGAAGCCTCAAGCAGATTAGTGATCATTCTCTCTCCGGTTCGAAGGCCAGTAGTTTAGGTATTAGAGATGATTTTGGTGAGCTGAAGATTTATTTTGATAGTGTGGACAAGAGAGACACAGCGAAGCAATTATTCCGTCAAAACTTATACAAGCGTTCAAAATTATATGATGCTAGAAAGTCCTCTTCTATTCTCTCTAGAGATGCTCGTACAAGACGATGGTCAATTAAGAAATCTGAAAGTGGTTACAAAAGGATGGAGGAATTTCTTGCTTCAAGACTGAGGGAAATTATGAAGGCAAATGCGTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGAGGTTATTACAATGGACATGGGTTAAGCTCTGTGAAGGATGACATACGCAGAATGTGCCGTGATGCAATGAAGGCAAAGAATCGCGGTGATGCTAATGATATGAATCATGTTATCTCATTATTTATTCAGCTTGCTACACGATTGGAGGAGAGTTCTAAATATGTGAATGACAGAGATACACTTTTGAAGTTATGGGGAAATGACTTACCCTTGGCGTTATGTTCTAGTTCCTCCAAGCACAAGAAGAATAGATTAGTGACCGACAGAAAGTATAGAAGTGATGACATACATGGTGGTTTGGATAATGGACAGCATGCTTCTGATAGAGAAATCAGAAGGCGTTTATCCAAATTGAATAAGAAATCTATGGACTCAGAGAGTGACACATCTGATGACCTTGATAGGTCTTCTGAAGATGGCAATAGTGATGGGGATACTTCAACCTCCAATACTGATAGTGACCAAGAAGTTCATTTAGAGAGTCGAACCAGGGATTCAAAAGGAAATGGATACTTAACACCTAATGATGGGTTGGATTTCATTACTGATGAGCGTGAATGGGGAGCTCGCATGACAAAAGCAAGTCTGGTTCCTCCTGTTACTAGGAAATATGATGTCATTGATCAATATGTCATTGTAGCTGATGAGGATGATGTGAAAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGTTAACTGCACAAAAGAATGGCACTGAGGAGTCTGATATGGAACTTCCTGAAGTCAAGGGTTACAAACCTAGAAAAATGCTTGAACATGAGGTTGTTGAGCAAGAGGTTTATGGAATTGATCCCTATACACACAATCTTTTACTTGATTCTATGCCAGATGAATTAGAATGGTCTCTACAAGAGAAGCACGTGTTTATAGAAGACACACTCCTTCGGACATTGAATATGCAAGTTAGGCATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATCCAAGAGATTGAAAAGAGTGCAGTGGAGCACTGTGACACAAGAATGATCAGTATGTGTCAAGGTATCCTAAAAGCAATAGCCAGACGTCCTGATGACAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGCAATAAGGAAGAAGGCTTTGGTGAAGAtgattttgttgtggagtttcTTGGAGAGGTGTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTGCAAAAAAACAGCAAAGATCCAGCACCAGAATTTTATAACATATACCTTGAGAGGCCAAAGGGTGATGCTGATGGTTATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTAGGCGGTCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAGCATGGTGAGGAGATCACATTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCAGTCTGTTTATGCGGAAGCCAAGTTTGCCGTGGGAGCTATCTAAACCTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGAATGGCATGGGATTCTTGATTGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTCCGTTTCTGAAGAGGACTATAATGACTTGGGAAGAGCGGGTTTAGGAAGTTGTTTGCTCGGAGGCTTGCCAGATTGGCTAGTTGCTTATGCGGCTCGCCTTGTgagatttattaattttgaaagaACAAAACTTCCTGAGGCAATTCTAAAGCataatttggaagaaaaaagaaaatatttttcagAGATATGTCTTGAAGTTGAAAGGAGTGACGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCAGTGACTCTTGATAAGGTAAGGTATGTTATGAGATGTATATTTGGTGATCCAATGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCATTCCTCTGGAAAGGAGAGGATTCATTTGTTGAGGAGCTTCTTCAGTGCATGACCCCTCATGTGGCAGAATCTGCCTTGAATGATCTCAAGTCCAAAGTTCGTGCCCGTGATCCTTTGGTTTCTAAAGATATTCAGAAAGCGGTTCAAAAATCTCTGTTGTGGTTGAGAGACGAGGTTCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTGATCCACATTTATGCTTATACCAAGTACTTCTTTAGAGTACTGGATTATAAAACTTTTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTGTGCCGACAAATTGGGAGCAGGATTGCAAGAGTATCGGAAGATATATGGTCAAAATTATTGTTTAGGGCAACTGATATTTTGGCATAATCAGAGTGATGTGGAGCCTGATTGTACCCTGGCTAGAGCCAGCAGGGGTAGCTTGTCATTGCCAGACATCAGTTCCTTTTATGCCAAGGCTCACAAGCCTTCACGGCAACGTGTTTATGGTCCAAAGACTGTCAGATCTATGTTGACAAGAATGGAGAAGCATCCCCAGAGACCTTGGCCCAAAGACCAGATTTGGTCATTCAAAAGCAGTCCTAAATTTTTTGGTAGCCCAATGCCATGTGGGACCGTTGAAATTTTGCATGGTTTTGCTGAAGAAGACGGAGCCATTCTGGTCAAACCTTTGTGGTTCATCATTCAGAACTGCCTGCCTCTTTTAGCGTGGGGAGTCTGTACATTATTAATTCTAAGCATAATTCCCCGATCGGCTTTTTCCGTCATTATTGTGTACAGAGGGATCATAAGGGAGGAAAATTTTCTTTTAAGTAGGGCACAAGCTTTTGGTCAAGCTCTTTTCAGCTGTGGCCTTGTTGATATTTATGCTTTGGCATGA 7428 0.4145 MGDGGVACMPLQQQQQQQHVNEKLPNAGEEAGCEGKSENGFSSEVVKAPEKKKVRKVIKKVVKKVRKKVVAGTKKAVTVKGELVSDRVSSNGVESGEICGGQKEEVEEGELGTLKWPGSELENGEFVSEKLPPPPPPLLPPPRSNEIENGDIVSERWKKVQVEKGEVDNWRKEEIVSEKSWKGEGEKGAYASWRGGIKGDVEKGEFIPDRWHRGDTGKDDYGYGRINRYESYRDKGWKTERDMECTSSSVRYASNDYFRKKDFNRSGSQHVKSAPRWESGQERNVRISSKIVDEEKYDDNGRIHAREYTSGSRLKRHGDDSDGWERKQYGDYAAFKSRRVSDDGSRHVYSEHRVSSEHYSRLPAERSYRNSSSKLSADKYSSRHHESLSTRLAYDKHGCSPGHSERSPHDRARYYDNKDHAPAHRHEKSPYGRDRSPYSREKYPHGRERSPCDRNWDRSRHRDHKLRSPTHAERSPQSRGRQRGCRDPTPNLIEQSPLDRTRENIDRETSNKPLSSEKHNSQYSCKNPENKNIQKESNLPGIESQGERNVHDANGSVEKGVCNEPEKEQKSCSPAVNCKDSPCLQLPPEEQPFMEDMEEDMDICDTPPHVPVVADSSIGKWFYLDYYGVEHGPSKLSDIKVLVDDGVLLPDHFIKHIDSDRWLTVENAASPLAAQSFPLIVSDTITQLVNPPEAPGNLLSDTGDILQTGPENYLEWQSPSLQSKLCPDDSVLAPQMLEDSHFDERVGVLLEGYDIIPGKELEAITEALQMNFEYAEWDDLGDYKGFPGPDTCPNMDHDSKIDFASSEHESQLIMPSDKDIGFTLGVPDDWFSARWSCKGGDWKRNDDSQDRYCKKKLVLNDGFPLCQMPKSGCEDPRWSSKDDLYYPSYSRKLDIPLWAFCTDESVDCTGAVSRAIQSKFGSVRGVKGNVHSVVRINSCVVKDQGSLVSESHHKTQGKDRYRSRSARPCSSTSDSKKSSAEEDSQSKTVNDQGSQGYCRSEELVNTSQDHLCAVNDLQLHLGDWYYLDGSGRERGPSSFSDLQSLVDQGIIKKYSSVFRKCDKLWVPVTSSTETYNVNLKSHQESSSVSGEFSGHRSVKSQGVSFGEPHSKSNMFNSLYPQFVGYTRGKLHELVIKSYKSREFAAVINEVLDPWINARQPKKEIEKQIYWKSEGDAHASKRARVLLDDSEEESDFVDDSFIIENDKSTLEALSGDVTFSTEESGINVSKEGGWGLLDGRMLARVFHFLRSDLKSLVFASMACKHWKASVNFYKEVSRNINLSSLSHSCTDSILWNIVNTYEKDKIKSMILMGCTNITADMLEKILLSVSGLSTVDIRGCNQFEELTPKFTNLKWIKSRNSRITKTADDPHKIRSLKQISDHSLSGSKASSLGIRDDFGELKIYFDSVDKRDTAKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKRMEEFLASRLREIMKANACDFFVPKVAEIEAKMKRGYYNGHGLSSVKDDIRRMCRDAMKAKNRGDANDMNHVISLFIQLATRLEESSKYVNDRDTLLKLWGNDLPLALCSSSSKHKKNRLVTDRKYRSDDIHGGLDNGQHASDREIRRRLSKLNKKSMDSESDTSDDLDRSSEDGNSDGDTSTSNTDSDQEVHLESRTRDSKGNGYLTPNDGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYVIVADEDDVKRKMRVSLPDDYAEKLTAQKNGTEESDMELPEVKGYKPRKMLEHEVVEQEVYGIDPYTHNLLLDSMPDELEWSLQEKHVFIEDTLLRTLNMQVRHFTGTGSTPMSYPLQPVIQEIEKSAVEHCDTRMISMCQGILKAIARRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVGGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEAILKHNLEEKRKYFSEICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPMKAPPPLEKLSPEAVVSFLWKGEDSFVEELLQCMTPHVAESALNDLKSKVRARDPLVSKDIQKAVQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRVLDYKTFTSPPVYISPLDLGPKCADKLGAGLQEYRKIYGQNYCLGQLIFWHNQSDVEPDCTLARASRGSLSLPDISSFYAKAHKPSRQRVYGPKTVRSMLTRMEKHPQRPWPKDQIWSFKSSPKFFGSPMPCGTVEILHGFAEEDGAILVKPLWFIIQNCLPLLAWGVCTLLILSIIPRSAFSVIIVYRGIIREENFLLSRAQAFGQALFSCGLVDIYALA 2475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 129 143 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 1607 1632 - -
Tsu06g01183 2475 SMART set_7 1851 1991 IPR001214 GO:0005515
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 947 994 - -
Tsu06g01183 2475 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2384 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 515 544 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 9 23 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 378 481 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 90 152 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 499 514 - -
Tsu06g01183 2475 ProSiteProfiles SET domain profile. 1846 1985 IPR001214 GO:0005515
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 340 574 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 1 41 - -
Tsu06g01183 2475 Gene3D SET domain 1833 2016 IPR046341 -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 1607 1668 - -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 340 364 - -
Tsu06g01183 2475 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1996 2384 IPR045606 -
Tsu06g01183 2475 MobiDBLite consensus disorder prediction 947 965 - -
Tsu06g01183 2475 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2384 - -
Tsu06g01183 2475 CDD SET_SETD2-like 1859 2007 - -
Tsu06g01183 2475 Pfam SET domain 1930 1985 IPR001214 GO:0005515
Tsu06g01183 2475 SUPERFAMILY SET domain 1860 2008 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01183 Tsu-Chr6 10850872 10867670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu06g01183 SET 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01183 K22748 - gmx:100781921 3635.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01183 06 10850872 10867670 Tsu06g01183 06 10850872 10867670 ECH