Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01181 ATGGAAGTGACAAGAATCCGCGGTTCTGCGGTTGTTTATGTCATCCTCCTTTGTGCTTTGGCTCAAGGGGGCTCAGAGGGGAACAAGGAAGATGATCATCAACTTTTGTTATCTTTCCTTCAAATTCATGGAAAACAGGAAGTGAAAGTGTGGAAACATTGCATGAAAGAATTGATAGTGAGAAAAAATGATGTAGAAGAAAGCAGTGGCATGAAGTCTATTCTTTCAATACAAAACcatgaaatgaaaagaaaagtttTGGACTGCGTAAAAACAAGTGCTACTCCTCCTGCTCCAGTTATTGAAGTACAAAGTAGTTCAAGATACTTGCTAAAAAAACATTCTAGATCAAGCGTAGCTTTAAAAAACgatcatcgtcatcatcatcagatAACAATAAGTTCGATTTCTGAATCACGAAATAATTACATACCACCTTTATCACCAATGTCTCCAAGTCCTAGTGCTAATAGTCCATCCCCAAAGCATAAATTGGTAGCAGAAATTCGTGTTTCAACGCCAGCAAGTGCTTCTTCGTCTTCACCATCACCATCACCCTCACCAGAAAGTGCTTCTCCACCTTCACCGACACCTGAtactggatttgattatttacCAGTTCCTCCAGAAAGTTCTTTGTCGTCTCCACCTCCGCCAAGTAAAAATAAAGATTCttctaaaaaatcaaaacctaaaACCGATGCTCCAACTCGTTCACCTTCTTCTAATAAAGAGTCTTCTAACAAAGAGTCTTCTAATAATGAGTCGACGGGGAAGGATTCAATTATATTAGCTGTTGTTGTATCAGCAATCATAATGTTTATTGGATTTTCCCTTTGCGTTCGCGAGGCCAAAAAAGATGACGGGCCTTTACTCGTATTAACCTCAAGTGATTATCCCGGAGGTACACCGAAGGTTGTTCGATTGGGAAGTATTaataataaagaagaagaatgtgATATTAACGAAGGATGTCCATTTAACAAAGGAAAAAATCCATCTAATGTTGGAAATATGTCCATGAAGGCCGAAAATAATAACGATTCTTCACTAGTCGAAGAAACAActacagcagcagcagcagcaacaacaacaactgctgctgctgctgcagcagcagcagcagcagcagcagcaaccacaacaacaacagaaGATATGGGACAAGTAACAGAAACTTCTTCTGGAAAACCAGCCCCTCCGCCTTCTGTTCCTCTGCCGCCGCCTCCTGGTTCTTTGCCTCCGCCTCCTGGTCTTCCAGCACCTTCTCCAGCACCGCCACCTCCTCTTGCTCCTCGTCCTCCACCACCTCCAAGAGCTGGTCATCCACCACCTGCTCCTCCCAAACCAATGGCTGGTAAAAACAAAGGTACACCTCTTGAACAAGCAAAAAAAGGGAGTTCTAGTGAAGGTGATTCTCAAAAGCCTAAACTAAAGCCATTTTTCTGGGAGAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCGTTCGTGTTCGATGAAGAAATGATGGAGTCTTTATTTGGATTCGCAAACCCGAACAAAAATGAAAGGAGAAAAGAATCAGCTTCTGAAAATTCAGTACAGTATATTCAGATTATTGACCCTAGGAAAGCGCAAAATTTATCAATTCTTTTACGTGCTCTGAATGTGACAACAGTTGAAGTTATTGATGCACTTAACGAAGGTAATGAGATTCCTTTGGAGCTTATCCAAACATTGTTGAAGATGGCGCCAACACAAGAAGAGGAATTGAAACTTAGGTTATTTTCTGGAGAACTAACTCAACTAGGCCCAGCAGAGAGGTTTCTCAAAGTATTGGTTGAAATTCCATTTGCTTTCCAACGTCTTGAATGTCTCATGTTCATGCTTATTCTTCGAGAAGAGGTTACAAGCATTAAGGATTCCTTCGCAACATTAGAGGTTGCTTGCGACAAGCTAAGAAAAAGCAGATTATTCTTAAAACTACTAGAAGCAGTACTCAAAACCGGAAACCGTATGAACGATGGTACCTACCGAGGGGGCGCTCAAGCATTTAGGCTTGACACACTTTTAAAACTTTCTGACGTAAAAGGAACAGACGGAAAAACAACACTGTTACATTTCGTGGTTCAAGAAACTATACGTTCTGAAGGAATAAGAGTAGTAAGAACCGAAAGAGCAAGCAGAAGCATTTCAAGCGTAGGAACCGACGATGTagattatgaaaatgaaaatacagAAGAACATTATCGTAGTCTTGGACTTCAAGTAGTTTCAAGCTTAAACAATGAACTCGAAGATGTTAGAAAAGCAGCATTAATAGACGGTGATGCAATTACCAGCACAGTTTTGAAACTCGGTCACTCGTTGGTTAAGACTCAGGAGTTTATGAACAATGAGTTTAAGAATTTGGAAGGGACTGAGTTTCAAAGTTGTTTAGAGAAATTTATGGATCATGCGAAAGTAGAGGTAATGTTTCTTGTTGAAGAAGAGAAAAGGATAATGGCATTGGTTAAGAGTACGGCGGATTTTTTTCATGGCAATGCAGGGAAAGATGAAGGGTTGCGTTTGTTTACGATTGTGCGTGATTTCTTGTTCATATTGGATAAGGTTTGTAAGGAGGTTAAGGAAGCTGCATTAAAGGCGATGAAGGAATCGGCTAAGAAAGAGGCTTTGTCAGCATCGGTGCCATCTTCATCGAATGCACAAAATCATCAACCGTCGCCATCACAGCAGCCAGCGCCGCCTTCTGATCTTCATAGGCGAGTGTTTCCAGCTATTGCAGAGCGGAGAGTGGATTATTCTAGCTCTGATGACGACGACGATGAGTTTTAG 2838 0.382 MEVTRIRGSAVVYVILLCALAQGGSEGNKEDDHQLLLSFLQIHGKQEVKVWKHCMKELIVRKNDVEESSGMKSILSIQNHEMKRKVLDCVKTSATPPAPVIEVQSSSRYLLKKHSRSSVALKNDHRHHHQITISSISESRNNYIPPLSPMSPSPSANSPSPKHKLVAEIRVSTPASASSSSPSPSPSPESASPPSPTPDTGFDYLPVPPESSLSSPPPPSKNKDSSKKSKPKTDAPTRSPSSNKESSNKESSNNESTGKDSIILAVVVSAIIMFIGFSLCVREAKKDDGPLLVLTSSDYPGGTPKVVRLGSINNKEEECDINEGCPFNKGKNPSNVGNMSMKAENNNDSSLVEETTTAAAAATTTTAAAAAAAAAAAAATTTTTEDMGQVTETSSGKPAPPPSVPLPPPPGSLPPPPGLPAPSPAPPPPLAPRPPPPPRAGHPPPAPPKPMAGKNKGTPLEQAKKGSSSEGDSQKPKLKPFFWEKVNAKPDQSMVWHEINAGSFVFDEEMMESLFGFANPNKNERRKESASENSVQYIQIIDPRKAQNLSILLRALNVTTVEVIDALNEGNEIPLELIQTLLKMAPTQEEELKLRLFSGELTQLGPAERFLKVLVEIPFAFQRLECLMFMLILREEVTSIKDSFATLEVACDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQETIRSEGIRVVRTERASRSISSVGTDDVDYENENTEEHYRSLGLQVVSSLNNELEDVRKAALIDGDAITSTVLKLGHSLVKTQEFMNNEFKNLEGTEFQSCLEKFMDHAKVEVMFLVEEEKRIMALVKSTADFFHGNAGKDEGLRLFTIVRDFLFILDKVCKEVKEAALKAMKESAKKEALSASVPSSSNAQNHQPSPSQQPAPPSDLHRRVFPAIAERRVDYSSSDDDDDEF 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01181 945 MobiDBLite consensus disorder prediction 380 476 - -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 380 397 - -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 235 257 - -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 117 257 - -
Tsu06g01181 945 Pfam Formin Homology 2 Domain 472 867 IPR015425 -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 330 356 - -
Tsu06g01181 945 PANTHER FORMIN-RELATED 2 361 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu06g01181 945 PANTHER FORMIN-RELATED 375 943 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu06g01181 945 PANTHER FORMIN-LIKE PROTEIN 2 361 - -
Tsu06g01181 945 PANTHER FORMIN-LIKE PROTEIN 375 943 - -
Tsu06g01181 945 Gene3D Formin, FH2 domain 477 907 IPR042201 -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 398 452 - -
Tsu06g01181 945 PRINTS Proline rich extensin signature 153 165 - -
Tsu06g01181 945 PRINTS Proline rich extensin signature 174 190 - -
Tsu06g01181 945 PRINTS Proline rich extensin signature 206 218 - -
Tsu06g01181 945 PRINTS Proline rich extensin signature 224 245 - -
Tsu06g01181 945 PRINTS Proline rich extensin signature 389 414 - -
Tsu06g01181 945 SMART it6_source 468 884 IPR015425 -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 893 909 - -
Tsu06g01181 945 SUPERFAMILY Formin homology 2 domain (FH2 domain) 536 894 - -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 891 923 - -
Tsu06g01181 945 MobiDBLite consensus disorder prediction 186 203 - -
Tsu06g01181 945 ProSiteProfiles Formin homology-2 (FH2) domain profile. 468 895 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01181 Tsu-Chr6 10836972 10842129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01181 472 934 FH2 protein (formin) Gene Family AT5G54650 61.752 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01181 - - lja:Lj3g3v2888350.1 683.715