Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01167 ATGGATTCTGGTAACCTTATGTTActagatgatgatgaacagaaGGAAGTAAGACTCTGGGAGAGCTTTGAAAATCCATCTGATACATTTCTACCAGGTATGAAGATGGATAGTAATTTGAAACTGACCAGTTGGAAAAGTGCTGATGATCCAGGAAGtggaaatttcacttttaagatGGAACAAATTAGTGGGCTCGAACGTTTTATGATCTTAAACTTCGATCAAATCTATTGGGAGAGCGAAGAGTATGGATCTTTGACTTATGATTCAAAGATTGATCAATCTGATGATATCAGCTCGGAGGTTTACAATCTGTTGATCAACTTCAGTTTACTCAGAGGGAGTAAAGGAATTCCTATGAAAAACTATGACAATACAAGGTTGTTTCTTGATTCTACAGGTATGATTCAGTGGGTGGACAATTTGTTGGTAGGTGGTGAATTATTGGTTAGGTGGAATCAGCCAAAAACCAAATGTTTCAGATATGATTTTTGTGGAAACTTTGCTAGCTGTAACGATGATGATTATGACTCATGCAAATGTTTACCTGGATTCTACAATGATTACTCAGACGATGGAGATACTTCCCTACAAGACAAGCTAAGTTGTGCGCGGAGAAAATCAGCATCGTGTACCAGAAATGACACGGTGTTTTTAAACTTGACAAAGATTAAAACTGGAATACCTGATAGAAAATTCAATGTGGAATATGAAGAAAATTGCACATATCTCTGCCTTGGGATGTGTCCACAGTGCCAAGCTTACTCATATGCTCCACCCCCTACCGATTACCAACGAGGTGGTCCTATTCCTTCAAACTGTTGGATCTGGACACACAATTTAACTACTCTTAAAGAAGACTACACTGATGGGGATGATGATCATAGACTCTTTGTATTAGTTGACAAATCAGATATAGAACCAACTCCAAGAACTTGTGAGCCTTGTGGTACAAACATGGTCCCTTATCCGCTTAGTACCGGATCAAATTGTGGAGACCTCAAATACTTTAACTTTATATGCAACACTTCGACAGGTCAACTTAACTTCACCACAAGCGACGAAGTTAGTTACAGAGTTATCCGTGTAAATCCTATTTCAAGAACATTTACCATTTATAATGAGGATAGTTCTTTAAATCGAAATTGTGGTGATGGATCTAACCGCACGGGAAATCTGAAGGTTTCTTCACCGTTTCACAGTGACAATTGGTGCTCTCAACAAGTGGAAGTTAGTTGGGATCCACCTTCCGAAGAACCTGTTTGTGATAACTCTGTTGATTGTCAAGGTTGGAAAAGTTCTACTTGTAGTAAAGGAAACAGGTGTGTTTGCAATGCAAACTATCGTTGGAATGGCGAGTCTTTAAGTTGTACCGAAAGTTTTTTAGAACCTACCTCCTCTCCTAATGCTACAATAGACTCAACAAAAGGAAACTCTAAAAGCTCGCTCCCTTTGATTCTTAGCTTAACTCTTACCGGAGTTGTTATTCTAGCTTGCATaattatttttgcttatgtaTGCAGACGGAGAATAGCTCATATCGTTAAAAAAGAGAAAGAAAACATACAGAGAAATATTAGAGGGGGCTTTTATGACAGTGAAAGACATGTGAAGGACTTGATAGACATGGAGGGATTAGAAGAGAATGACAATGAAGGAATCGAGGTTCCTTATTTCGATTTCGAGAGCATAGTAAAGGCTACAGATGATTTTTCAGATGCAAATAAGCTTGGAAGAGGTGGTTATGGGCCAGTATATAAGGGTAAGCTTCAAGGCGGTCAAGAAATTGCGGTGAAGAGGCTTTCAAGTGTTTCTTCACAAGGATTACAGGAATTCAAGAATGAGGTTGTTTTGATTGCAAAACTCCAACATCGAAACCTTGTTAAATTACGGGGGTATTGCataaaaggagaagaaaaaattCTACTCTACGAATATATGCCTAACAAGAGCTTGGACTTATTGATCTTCGATCCTACAAAGAGCATAATTTTGGATTGGCAAATGCGGTTTGACATAATTCTTGGAATTGCTCGTGGAATGCTCTATCTTCATCAAGATTCAAGATTGAGAGTTATTCATCGAGATCTCAAAACCAGCAACATTCTTCTAGATGAAGAGATGCAACCAAAAATATCAGATTTTGGTTTGGCAAGAATATTTGGAGGAAAAGAAACCGAGGCAAACACAGAGAGGGTTGTTGGGACATATGGATACATGTCTCCCGAGTATGCATTGGACGGACAATTCTCTACAAAATCAGATGTATTCAGCTTTGGTGTTGTCTTGCTCGAGATCATAAGTGGGAAAAAGAATACGGGATTCtttcaaacaaaagaaatttcaaGCCTTTTGGGTTATGCGTGGATGCTATGGCGAGAGGAAAAGTTGCAAGATTTATTGGACCAATCTTTGTGCGATACTTACAACGCTAACCAATTTATTCGGTGTTCACAAATTGGACTCTTATGCGTACAAGATGAACCAGGAGATCGACCAAACATGTCAAATATTGTAACAATGCTAGACAATGAAACTACAACGCTCCCAACCCCTAATCAACCAACCTTTTTTATGCGAAAAAACCTATCGAACACAGGTTCTTCAAGTCTACAGCTTGAAAGTAGCATTCAAGAAGGCCGATAA 2649 0.3767 MDSGNLMLLDDDEQKEVRLWESFENPSDTFLPGMKMDSNLKLTSWKSADDPGSGNFTFKMEQISGLERFMILNFDQIYWESEEYGSLTYDSKIDQSDDISSEVYNLLINFSLLRGSKGIPMKNYDNTRLFLDSTGMIQWVDNLLVGGELLVRWNQPKTKCFRYDFCGNFASCNDDDYDSCKCLPGFYNDYSDDGDTSLQDKLSCARRKSASCTRNDTVFLNLTKIKTGIPDRKFNVEYEENCTYLCLGMCPQCQAYSYAPPPTDYQRGGPIPSNCWIWTHNLTTLKEDYTDGDDDHRLFVLVDKSDIEPTPRTCEPCGTNMVPYPLSTGSNCGDLKYFNFICNTSTGQLNFTTSDEVSYRVIRVNPISRTFTIYNEDSSLNRNCGDGSNRTGNLKVSSPFHSDNWCSQQVEVSWDPPSEEPVCDNSVDCQGWKSSTCSKGNRCVCNANYRWNGESLSCTESFLEPTSSPNATIDSTKGNSKSSLPLILSLTLTGVVILACIIIFAYVCRRRIAHIVKKEKENIQRNIRGGFYDSERHVKDLIDMEGLEENDNEGIEVPYFDFESIVKATDDFSDANKLGRGGYGPVYKGKLQGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILLYEYMPNKSLDLLIFDPTKSIILDWQMRFDIILGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIFGGKETEANTERVVGTYGYMSPEYALDGQFSTKSDVFSFGVVLLEIISGKKNTGFFQTKEISSLLGYAWMLWREEKLQDLLDQSLCDTYNANQFIRCSQIGLLCVQDEPGDRPNMSNIVTMLDNETTTLPTPNQPTFFMRKNLSNTGSSSLQLESSIQEGR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01167 882 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 51 IPR036426 -
Tsu06g01167 882 PIRSF SRK 1 326 IPR024171 GO:0004674
Tsu06g01167 882 PIRSF SRK 376 881 IPR024171 GO:0004674
Tsu06g01167 882 Gene3D Transferase(Phosphotransferase) domain 1 648 855 - -
Tsu06g01167 882 ProSiteProfiles Protein kinase domain profile. 572 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01167 882 CDD STKc_IRAK 578 845 - -
Tsu06g01167 882 Pfam D-mannose binding lectin 1 41 IPR001480 -
Tsu06g01167 882 Pfam Protein tyrosine and serine/threonine kinase 576 843 IPR001245 GO:0004672|GO:0006468
Tsu06g01167 882 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 872 - -
Tsu06g01167 882 Pfam S-locus glycoprotein domain 122 187 IPR000858 GO:0048544
Tsu06g01167 882 SUPERFAMILY Protein kinase-like (PK-like) 554 862 IPR011009 -
Tsu06g01167 882 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 872 - -
Tsu06g01167 882 ProSiteProfiles PAN/Apple domain profile. 212 301 IPR003609 -
Tsu06g01167 882 Gene3D Phosphorylase Kinase; domain 1 538 647 - -
Tsu06g01167 882 SMART serkin_6 572 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01167 882 MobiDBLite consensus disorder prediction 863 882 - -
Tsu06g01167 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01167 Tsu-Chr6 10720614 10726162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01167 466 861 Receptor kinase-like Gene Family AT4G05200 48.232 5.17e-126 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu06g01167 PK_Tyr_Ser-Thr 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01167 - - mtr:MTR_0148s0080 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01167 06 10720614 10726162 Tsu06g01167 06 10720614 10726162 ECH