Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01119 ATGTACCATGAGGGCGATACGCCTTGCTTGGATAATGGAGAGCAATGTTGGGCTTTAGGACTACACTTCTTTAGAGAGAGAGAACCAGACGGTGCTGCtcagaaacaacaacaacaacatcaaagaAAGAGACTTTCATACACAACCTTTGTCAAATTTTCCTTTGCTTTTCCTACCTTATTCTCCTCGtctttcttcttttacaaaGTTTTTGGAGTTATTGAGATTTCAACTGCTGTTACTGATCCTACTGATGTTGCTGCACTTAATAGCTTATATGCTTCATTGGGATCTCCTCTTCTGCCTGGGTGGGTTGCTAGTGGTGGAGATCCGTGCGGAGAAGGGTGGCAAGGCATCCAGTGTAATGGTTCGTTCATACAAAAAATTGTTCTAAACGGTGCAAATTTGGGAGGAGAGCTAGGTGATAAACTTGCAACATTTGTTTCAATCTCAGTAATTGATCTGAGCAACAACAACATTGGAGGAAGTATTCCATCGAATTTGCCAGCTACCATGAGAAACTTTTTTCTTTCAGCCAACCTGTTTACCGGAAGTATTCCAGCATCTTTATCCGCTTTAACTGGACTGAGTGACATGTCTCTTAACAACAATCATTTAACTGGAGAAATACCAGATGCGTTTCAGTCACTTACACAATTGATCAATCTAGATTTATCGAGCAATAACTTGAGCGGGGAACTACCTCCTTCGATGGAGAACTTGTCATCTTTGACCACCCTACGCTTGCAGGATAATCAACTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTCGAGAATAACCAATTTGCTGGCCCGATACCTCCGAAGTTGCTAAGCATCCCTAAATTCAGTCAAGCTGGAAATCcatttaataataattccaCGGCAACTCGTGCTCCCACACCTCGCTCCCCAGTGACAGCACCGCCAGGAGCACCACCAGGACCACCGTTTTTTGTAGTACCATCTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTGGCTCTGGTTCTGGCTCTGGCTCTGGCTCTGTACCTACCAAACAGGCTGATGGACCGACTGTAGCGACTCAGTCAAAATCTGggaaatcaaacaaacataCCAAAAGGGTGGTTTTGATATCTATTGGCAGTATTTTGGCATTCATTATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGATAGAAGGGAACGGCGGGTTGACCGAAGGTCCAGGCGACATCAAATTGGTGCATATGGAGATGAAAGACAACAAAATCCTAGGGATTTAGGGGCTATAGTTCAACCACCAGTTCAAACAGAAAAAGTACCGATACCGACACCGACACGGGATGTCTTGAGGCCACATACTGATCGCCAAGAAGAGCCTAGGAGAGTGTGGGCTGTTCCAAATGCACAGGATAAGCAAGAGAAGGATGTGCAAAGAATGATGGCAATACCAAAGCCGGTTCATCATGAGATTGATATCAGTACACCAGAAGTGTATTCTGTGCCTCCTCCTCCACCTCCACCGccacctcctcctcctccgCCACCCCCACCTCCACCCCCACCGCCACCTCCTCCTGTTCTTCCTACCAAGAGGATGATTGTTGAGCCAACAATTCCCCGCAGAGGAACTAATGCCGGTCCATCCTCAAGAAGTTCAATTCCACCTCCTACTTTTGCAAAATCTTTCACTATCGCATCCCTTCAACAGTATACAAATAGCTTTTCTCCAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTGTACAGGGCAGAGCTTCCTGGTGGGAAGCTACTTGCTGTAAAGAAACTTGACAGAAGAGCCTCTGTTAACCAGAAGGATGATGAGTTTCTTGAATTGGTAAATAGTATCGACAGAATAAGACATACAAATATTGTTGAGCTCATCGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGTACTGCAGTAACGGGTCACTGTATGATGCACTTCACACAGATGAAGAATTCAAAGCAAAACTATCATGGAATGCTCGCATTCGGATGGCACTTGGTACAGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCGCCTGTGGTACACAGAAATTTGAAGTCTGCCAATGTTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCAGGGTCTGTAACTCAGCTCTCGGGGAACTTGCAATCAGCTTATGGTTATGGAGCTCCAGAATTTGAATCAGGAACTTACACTTACCAAAGTGATGTATACAGCGTTGGAGTAGTTATGTTAGAACTTTTGACCGGCCGTCAGTCCCATGACAGGTTAGAATGcataagcaaaataaaatacttCAGCATCTGTTTGGACTATTTATATGCAGTTAATTCATTGTTTGGAACATCTCTATCAGGACACGTCCACGAGGGGAGCAATTTCTTGCTAGATGGGCAATTCCTAAACTTCACGATATTGATGCATTATCAAAGATGGTTGATCCTTCTTTAA 2556 0.4249 MYHEGDTPCLDNGEQCWALGLHFFREREPDGAAQKQQQQHQRKRLSYTTFVKFSFAFPTLFSSSFFFYKVFGVIEISTAVTDPTDVAALNSLYASLGSPLLPGWVASGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLATFVSISVIDLSNNNIGGSIPSNLPATMRNFFLSANLFTGSIPASLSALTGLSDMSLNNNHLTGEIPDAFQSLTQLINLDLSSNNLSGELPPSMENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLSIPKFSQAGNPFNNNSTATRAPTPRSPVTAPPGAPPGPPFFVVPSSGSGSGSGSGSGSGSGSGSGSGSGSVPTKQADGPTVATQSKSGKSNKHTKRVVLISIGSILAFIILVLALVLFIPRCDRRERRVDRRSRRHQIGAYGDERQQNPRDLGAIVQPPVQTEKVPIPTPTRDVLRPHTDRQEEPRRVWAVPNAQDKQEKDVQRMMAIPKPVHHEIDISTPEVYSVPPPPPPPPPPPPPPPPPPPPPPPPPVLPTKRMIVEPTIPRRGTNAGPSSRSSIPPPTFAKSFTIASLQQYTNSFSPENLIGGGMLGTVYRAELPGGKLLAVKKLDRRASVNQKDDEFLELVNSIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLYDALHTDEEFKAKLSWNARIRMALGTARALEYLHEQCQPPVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVTQLSGNLQSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDRLECISKIKYFSICLDYLYAVNSLFGTSLSGHVHEGSNFLLDGQFLNFTILMHYQRWLILL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01119 851 MobiDBLite consensus disorder prediction 553 568 - -
Tsu06g01119 851 Pfam Protein tyrosine and serine/threonine kinase 589 792 IPR001245 GO:0004672|GO:0006468
Tsu06g01119 851 MobiDBLite consensus disorder prediction 330 373 - -
Tsu06g01119 851 SUPERFAMILY L domain-like 81 287 - -
Tsu06g01119 851 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 71 791 - -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 287 377 - -
Tsu06g01119 851 SUPERFAMILY Formin homology 2 domain (FH2 domain) 526 534 - -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 506 541 - -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 310 327 - -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 448 487 - -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 291 309 - -
Tsu06g01119 851 Gene3D Phosphorylase Kinase; domain 1 559 662 - -
Tsu06g01119 851 PANTHER OS01G0253100 PROTEIN 71 791 IPR045271 GO:0004714|GO:0006468
Tsu06g01119 851 ProSiteProfiles Protein kinase domain profile. 585 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01119 851 Gene3D Ribonuclease Inhibitor 82 306 IPR032675 -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 549 568 - -
Tsu06g01119 851 Gene3D Transferase(Phosphotransferase) domain 1 663 810 - -
Tsu06g01119 851 SUPERFAMILY Protein kinase-like (PK-like) 560 799 IPR011009 -
Tsu06g01119 851 MobiDBLite consensus disorder prediction 508 541 - -
Tsu06g01119 851 Pfam Leucine rich repeat N-terminal domain 83 122 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01119 Tsu-Chr6 10129288 10140177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01119 76 791 Strubbelig Receptor Gene Family AT4G03390 55.387 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tsu06g01119 PK_Tyr_Ser-Thr 9.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01119 - - mtr:MTR_4g046113 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04915 02 58179025 58189164 Tsu06g01119 06 10129288 10140177 PCT