Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01114 atgaacaacaacatcaaaCTCGCTCCATGGACGTTTCCCACCGAATTGTCACAGTCTCCCAACCTCGTCGCACTTGACCTCGGAGAAACCAACCTCGTGGGTCACCTGCCGGATATATTCAATACTTTAGTCAGTTTGCAGAACCTCCGCCTTTCATATAACAAACTAACGGGGGATTTACCTATGTCTTTCTTGGGATCTGGTATTCAGAACTTGTGGCTCGACAATCAGAACCCGAACAACATGTCCGGGTTCACAGGTTCTATTTCCGTGCTTGCTTCAATGATCCAGTTGACTCAAGTTTGGCTTATGGAAAACAGGTTCACTGGTCAAATTCCTGATTTCACCAACTGTACCGATTTATTTGATCTGCAGCTTCGTGATAATCAGTTAACAGGTGTTGTTCCGCCTTCTTTATTGGTTATGTCTAGCTTGAAGAATGTTTCCTTGGACAACAATCATTTGCAGGGCCCTTTTCCTTCTTTTGGGAAAGGTGTATTGTTCGACCTTGATGGGACGACAAATAGCTTCTGTCAAAACACTTCTGGACCTTGTGATCCGCGGGTCACTACTTTGCTCTATGTTGCCGAAGATTTTGGGTATCCACTTCAATTGGCGAATTCTTGGAAAGGGAACAATCCATGTCAAAATTGGAGCTTCATTGTGTGTTCAGCAGGGAACATTATTACAGTGAACTTAGCCAAGCAGAAATTGAAGGGAACCATTTCACCTGCATTTGCAAATTTAACTGATTTGAGGAACTTGTATTTGGGTGATAACAATTTGACAGGTTCAATACCTCAGAGCTTGACAAGTTTGCTGCATCTTCAGGTTCTTGATGTATCTATCAATAATCTATCTGGTGAGATTCCTAAATTCTCATCTATGTTGAGATTCAACTCAACCGGTAATGTTTTGCTTCAACTTGGAAGTCTGCATGAAAACACAACTGCTTCTGCGCCGTTGCTGGCTTGGATTCTAGGGGCATCGTTGTTTGGTGTAGGAATTATACTATTTATTCTGATTATTTGTAGATGTAAGGGATATCTCAGCTTAGTAAAAACAAGGATCTTCAAGAAACCAAGAATGTTTATTGATCATAACATTGAGGATTTCATAAAAAGATATAATTTGTCAGTGCCGCAGCGTTATAGTTATGCAGAAGTGAAAAGGTTCACAAACTCATTTCGAGATAAGTTGGGTCAAGGGGGATATGGTGTTGTGTACAAAGCCAGTTTACCTGATGGTCGTCATGTAGCGGTGAAAGTAATAAGCAAGTGTAAGGGAAATGGAGAAGAATTTATAAATGAAGTTGCAAGCATAACTAAAACATCACATGTGAACATTGTCTCACTTTTGGGTTTTTGTTATGAGAAGAACAAAAGAGCATTGATATATGAACTCGTGTCCAATGGATCATTTGATAAGTTCATATATCGAAGTGGATTTCCAAATGCTATTTGTGATTTGGATTGGAGCACATTGTTCCAAATTGTACTTGGCATTGCTCGAGGACTAGAGTACTTACATCAAGGTTGTATTTCAAGAATTTTGCATCTTGATATCAAACctcaaaatattcttttagaTGAAGATTTTTGCCCAAAAATATGTGATTTTGGTTTGGCTAAAATATGTCAAAAGAAAGAGAGTATTGTGTCAATGCTTGGCACAAGAGGAACTATAGGCTACATAGCACCGAAAGTATTTAGTCGAGCATTTGGTGGAGTTTCTTCTAAGTCTGATGTATACAGTTATGGCATGTTGATTCTTGAAATGACTGGAGGAAGAAAGAATTATGACACTGGAGGGTCTCATTCAACTGAAATGTACTTTTCAGATTGGATATATAAGGATCTTGAGCAAGGTAATACTCATTTAAATAGTTCGGCAATCTCAGACGAAGAAAATGATATGGTGAAGAAGATTACTATGGTGAGTTTGTGGTGCATTCAAACAAATCCATCAGACAGACCACCAATGAGTAAAGTAATAGAAATGCTACAAGGACCACTTCATTCAATGCCTTATCCTCCAAAGCCTGTCTTATTTTCTCCAAAGGGGCCATCGTTGCAAATGTCAGATATGTCTTCCAGTAACTTTGACGACTCACATTCAATTATGATagagaaagaataa 2139 0.3829 MNNNIKLAPWTFPTELSQSPNLVALDLGETNLVGHLPDIFNTLVSLQNLRLSYNKLTGDLPMSFLGSGIQNLWLDNQNPNNMSGFTGSISVLASMIQLTQVWLMENRFTGQIPDFTNCTDLFDLQLRDNQLTGVVPPSLLVMSSLKNVSLDNNHLQGPFPSFGKGVLFDLDGTTNSFCQNTSGPCDPRVTTLLYVAEDFGYPLQLANSWKGNNPCQNWSFIVCSAGNIITVNLAKQKLKGTISPAFANLTDLRNLYLGDNNLTGSIPQSLTSLLHLQVLDVSINNLSGEIPKFSSMLRFNSTGNVLLQLGSLHENTTASAPLLAWILGASLFGVGIILFILIICRCKGYLSLVKTRIFKKPRMFIDHNIEDFIKRYNLSVPQRYSYAEVKRFTNSFRDKLGQGGYGVVYKASLPDGRHVAVKVISKCKGNGEEFINEVASITKTSHVNIVSLLGFCYEKNKRALIYELVSNGSFDKFIYRSGFPNAICDLDWSTLFQIVLGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKICDFGLAKICQKKESIVSMLGTRGTIGYIAPKVFSRAFGGVSSKSDVYSYGMLILEMTGGRKNYDTGGSHSTEMYFSDWIYKDLEQGNTHLNSSAISDEENDMVKKITMVSLWCIQTNPSDRPPMSKVIEMLQGPLHSMPYPPKPVLFSPKGPSLQMSDMSSSNFDDSHSIMIEKE 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01114 712 PANTHER TYROSINE KINASE FAMILY PROTEIN 30 708 - -
Tsu06g01114 712 Gene3D Ribonuclease Inhibitor 187 309 IPR032675 -
Tsu06g01114 712 Pfam Protein kinase domain 398 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01114 712 Gene3D Ribonuclease Inhibitor 1 185 IPR032675 -
Tsu06g01114 712 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Tsu06g01114 712 SUPERFAMILY Protein kinase-like (PK-like) 374 668 IPR011009 -
Tsu06g01114 712 MobiDBLite consensus disorder prediction 686 712 - -
Tsu06g01114 712 ProSiteProfiles Protein kinase domain profile. 394 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01114 712 SUPERFAMILY L domain-like 12 297 - -
Tsu06g01114 712 SMART serkin_6 394 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01114 712 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 708 IPR045874 GO:0004672
Tsu06g01114 712 Gene3D Phosphorylase Kinase; domain 1 367 468 - -
Tsu06g01114 712 Gene3D Transferase(Phosphotransferase) domain 1 469 675 - -
Tsu06g01114 712 MobiDBLite consensus disorder prediction 690 704 - -
Tsu06g01114 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01114 Tsu-Chr6 10085017 10087306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01114 366 705 Receptor kinase-like Gene Family AT5G38280 56.196 6.62e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu06g01114 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01114 - - cam:101489592 854.744