Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01112 ATGTCTAAAGAAAGAGAAACTATAGGCTACATAGCACCAGAAGTATTTAGTCGAGCATTCGGTGGAGTTTCTTCTAAATCTGATGTATACAGTTATGACATGTTGATTCTTGAAATGACGGGAGGAAGAAAGAATTATGACACTGGAGGGTCGCATACGACCGAAATGTACTTTCCAGATTGGATATATAAGGATCTTGAGCAAGGTAATACTCATTTAAATAGTTTGGCGATCTCAGAAGAACAAAATGATATGATGAAGAAGATTACTATGGTGAGTTTGTGGTGCATTCAAACAAATCCATCAGACAGACCACCAATGAGTAAAGTAATAGAAATGCTACAAGGACCACTTCATTCAATGTCGTATCCTCCAAAGCCTGTCTTATTATCTCCAAAAGGGCCATCGTTGCAAATGTCAGATATGTTTTCCAGTAATTTTAACGACTCAAATTCAATTATGATAGAGTAG 471 0.3673 MSKERETIGYIAPEVFSRAFGGVSSKSDVYSYDMLILEMTGGRKNYDTGGSHTTEMYFPDWIYKDLEQGNTHLNSLAISEEQNDMMKKITMVSLWCIQTNPSDRPPMSKVIEMLQGPLHSMSYPPKPVLLSPKGPSLQMSDMFSSNFNDSNSIMIE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01112 156 Pfam Protein tyrosine and serine/threonine kinase 4 114 IPR001245 GO:0004672|GO:0006468
Tsu06g01112 156 Gene3D Transferase(Phosphotransferase) domain 1 1 125 - -
Tsu06g01112 156 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 154 - -
Tsu06g01112 156 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01112 156 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 154 IPR045874 GO:0004672
Tsu06g01112 156 SUPERFAMILY Protein kinase-like (PK-like) 6 145 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01112 Tsu-Chr6 10074517 10074987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01112 5 151 Receptor kinase-like Gene Family AT5G38280 50.980 8.44e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu06g01112 PK_Tyr_Ser-Thr 2.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01112 - - cam:101489912 227.254