Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01106 ATGGGTTGTTGTGTGTCAACGAGCAGTCGAAGTACTTGTAGTAGCGGGAGCAATGGAGATATGGCTACTCCATCTTGCTTAGAAATTGGATTCTGTGGGAAAAAGAGAGCgaggagaacgttctctgacCATGTTATTTCTCTACATCATTTATCATCATTACCTAGCAGGATTTTCACTAATGGAAAGAGTCGAGGTTCATGCATATTTACGCAGCAGGGCCGTAAGGGAATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCCGAAGATATGATCTTTTGTGGTGTTTTTGATGGCCATGGTCCACAAGGTCATCTTGTTGCGCGTAAAGTGAGAGATACCTTACCAGTAAAATTGCTTTCATTTTTGCATTCTTATGAATCAAAGCGAAATGGTTCTGCCAAAGCTTGTTTGAAACGGAACTTGAAATCGGACGGTGGAGACTCTGAGAAGGATATGTCTTCTGAGGATAAACTGAACTCGACTTGGAAAGAAGCTTTCATGAAAGCATACAAGGCCATGGACAAAGAGCTCAGTTCTCATCCGAAACTCGACTGTTTCTGTAGTGGGAGCACATCTGTGACTATAGTGAAGCAGGGTTCAAATCTCTTCATGGGATATATCGGTGATTCTCGAGCAATCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTACCAAGAGAAGCGGAAAGGATCAAGCAGTGTAAGGGTAGGGTTTTTGCTTTGCAAGATGAACCGGAAGTGTCTAGGGTATGGTTGCCTTTTGATGATGCACCGGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAATATGGTGTGATATCTATACCTGAATTTTCTCACCGGCTGCTTACTGATAGAGATCAATTCATTGTTCTTGCCTCAGATGGGGTTTGGGATGTCTTAAGTAATGAGGAGGTAGTTGAGATAGTATCATCGGCACCAACACGATCATCAGCAGCAAGAATTCTAGTAAATTCCGCTGCTCGTGAATGGAAACTCAAGTACCCAACTTCGAAGATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGCAAAATGGATTCAGAGTCAGATTATGAGGAACAAGGCTTCTCTTCTGCTACCATTCAAAGCAACCATTCGGGAAATCCAATCGAATCAGATGATGGACAAAAGTCCGAGCCATCTTTGCAAAGGAACTTTACTGTGAGATCATCGGAAGAAAACGAGATTAATGGAGCAGTGTCGGTTGATGTTGAAGATGGAACAGCACCAGCTGATGATCAAAACTGGTTAGGCTTGGAAGGGGTCACTCGTGTAAACTCGCTCGTCCAACTTCCTAGATTTTCGGAAGAAAGGTCAAAGTCAAACTCTTGA 1419 0.4242 MGCCVSTSSRSTCSSGSNGDMATPSCLEIGFCGKKRARRTFSDHVISLHHLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDMIFCGVFDGHGPQGHLVARKVRDTLPVKLLSFLHSYESKRNGSAKACLKRNLKSDGGDSEKDMSSEDKLNSTWKEAFMKAYKAMDKELSSHPKLDCFCSGSTSVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENEINGAVSVDVEDGTAPADDQNWLGLEGVTRVNSLVQLPRFSEERSKSNS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01106 472 Pfam Protein phosphatase 2C 141 340 IPR001932 -
Tsu06g01106 472 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Tsu06g01106 472 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Tsu06g01106 472 MobiDBLite consensus disorder prediction 381 426 - -
Tsu06g01106 472 MobiDBLite consensus disorder prediction 380 444 - -
Tsu06g01106 472 CDD PP2Cc 65 370 IPR001932 -
Tsu06g01106 472 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
Tsu06g01106 472 SMART PP2C_4 50 368 IPR001932 -
Tsu06g01106 472 Gene3D - 59 378 IPR036457 -
Tsu06g01106 472 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01106 Tsu-Chr6 10043521 10048710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01106 1 470 PP2C-type Phosphatase Gene Family AT1G03590 69.247 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01106 - - gmx:100813306 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04927 02 58287996 58291505 Tsu06g01106 06 10043521 10048710 PCT