Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01069 ATGGAAGAGATACAAGTAGAGCCACCAAAGGCAACAGAAGTACGAGTTAAGATGTTGGGTTCCAGTGTCTGCCACACAGATATCTCAAGCCTTAAAGGATTCCCACATAATCaatttcctctagcacttggaCATGAAGGAATTGGTGTTATTGAGAGTGTTGGTGATGAAGTAACAAATCTAAAAGAAGGTGATTTTATACTTCCAACATACATAGGAGAATGTGGAGAATGTGAGAATTGTGTTTCAGAAAAAACCAATTTGTGTTTAACACATCCTGTGAGATTGACTGGTCTAATGCCAGATAACACTTCAAGATTGTCTGTACGAGGTCAACCACTATACCATGTTTTGAGTTGTGCTACTTGGTCAGAGTATGTGGTTGTTGATATCAACTACCTTGTTAAAGTTGATCCAACTATTGATCTAGCTTATGCTAGTTTCATCTCATGTGGATTTTCAACTGGTTATGGAGCTTCTTGGAAGGAAGCTGATATTCAAAGGGGTTCCACTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCTATAAGTGGGGCCAAGATGATGGGAGCAAGTCAGATAATTGGAGTTGACAAAAATGtgatgaagaaagaaaaaggagaaGCTTTTGGAATGACCCATTTTATCCATTCTAATGTTCCTGATAAATCTGCTTCAGATTTGGTTAAAGAGTTTACTGGAAGGGGTGTAGATTATTGCATTGAATGCACTGGAGTTGCACCTTTGCTTACTGAATCTTTGGAAGCCACAAAAGTGGGAACAGGTAAAGCAATTTCAGTTGGTATTGGAGTAGAACTTGTTGTACCATTTGGACTTCTTGGCATTCTGTTTGGTAGAACCTTAAAAGGTTCTGTTCTTGGAGGtataaaaaccaaaacagaTATTGCTACCATAGTGAACAAATGTCAGAAAGAGGAATTCCCTCTTCATGAACTTCACACCCATGAGGTTCCTTTTGTAGATATAGGCAAAGCatttgaattattgaaagaacCAGATTGTGTGAAAGTTGTTATCAAGATGTGA 1053 0.3637 MEEIQVEPPKATEVRVKMLGSSVCHTDISSLKGFPHNQFPLALGHEGIGVIESVGDEVTNLKEGDFILPTYIGECGECENCVSEKTNLCLTHPVRLTGLMPDNTSRLSVRGQPLYHVLSCATWSEYVVVDINYLVKVDPTIDLAYASFISCGFSTGYGASWKEADIQRGSTVAVFGLGAVGLGAISGAKMMGASQIIGVDKNVMKKEKGEAFGMTHFIHSNVPDKSASDLVKEFTGRGVDYCIECTGVAPLLTESLEATKVGTGKAISVGIGVELVVPFGLLGILFGRTLKGSVLGGIKTKTDIATIVNKCQKEEFPLHELHTHEVPFVDIGKAFELLKEPDCVKVVIKM 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01069 350 Gene3D - 1 345 - -
Tsu06g01069 350 PANTHER ALCOHOL DEHYDROGENASE 1 349 - -
Tsu06g01069 350 SMART PKS_ER_names_mod 1 348 IPR020843 GO:0016491
Tsu06g01069 350 SUPERFAMILY GroES-like 1 167 IPR011032 -
Tsu06g01069 350 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 44 58 IPR002328 GO:0008270|GO:0016491
Tsu06g01069 350 Pfam Zinc-binding dehydrogenase 179 299 IPR013149 -
Tsu06g01069 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 311 IPR036291 -
Tsu06g01069 350 Pfam Alcohol dehydrogenase GroES-like domain 12 137 IPR013154 -
Tsu06g01069 350 Gene3D - 156 293 - -
Tsu06g01069 350 CDD liver_alcohol_DH_like 1 349 - -
Tsu06g01069 350 PANTHER ALCOHOL DEHYDROGENASE-RELATED 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01069 Tsu-Chr6 9736231 9739311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01069 13 151 Monolignol Biosynthesis Gene Families AT4G37970 30.496 4.05e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01069 K00121 - gmx:100798341 538.88