Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01066 ATGGCTGCTGCTGACAACACCACCAAACCCACGgaTTATTACAAAGTACTGGAGATTGCTTATGATGCAACAGATGAAGATATCAGATTAAATTACCGAAGACTTGCCCTGAAATGGCATCCTGACAAACACAAAGATGATAGTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTACTGAGCGATCCTGCCAAGCGTTTAGACTATGATTTAACCGGGTCATGTGAAATTGAGAAGTATAGCTTGCAGGAATATCTTGCCAGATTTAAAGGAATGATTCTGACTTGCAATGGACTTGGTATCAGCCACGAAGACAGATGGTCACCACAATTGATTGAAGGTTTTGAACCACCAGATAAATAA 375 0.3947 MAAADNTTKPTDYYKVLEIAYDATDEDIRLNYRRLALKWHPDKHKDDSAVTAKFQEINEAYNVLSDPAKRLDYDLTGSCEIEKYSLQEYLARFKGMILTCNGLGISHEDRWSPQLIEGFEPPDK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01066 124 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 116 - -
Tsu06g01066 124 CDD DnaJ 12 66 IPR001623 -
Tsu06g01066 124 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Tsu06g01066 124 Pfam DnaJ domain 12 74 IPR001623 -
Tsu06g01066 124 SMART dnaj_3 11 69 IPR001623 -
Tsu06g01066 124 SUPERFAMILY Chaperone J-domain 8 97 IPR036869 -
Tsu06g01066 124 Gene3D DnaJ domain 2 91 IPR036869 -
Tsu06g01066 124 PRINTS DnaJ domain signature 49 69 IPR001623 -
Tsu06g01066 124 PRINTS DnaJ domain signature 69 88 IPR001623 -
Tsu06g01066 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Tsu06g01066 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Tsu06g01066 124 PANTHER DNAJ PROTEIN-LIKE 4 116 - -
Tsu06g01066 124 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01066 Tsu-Chr6 9711926 9716647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01066 1 74 C2H2 Transcription Factor Family AT1G74250 43.038 8.18e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01066 - - gmx:100305987 211.846