Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01064 ATGGCTTCTGGATCATCCGGTCGCGGCGGTAATCCCGGTTCCAAAGGCTTCGATTTTGCATCCGATGACATCCTTTGCTCATACGACGACTTTTCCAACAGGGATTCCAATTCCAATGGCAATCACACCGATTCAACCAAGgaTTTTCAAAAATCAAGAGTAGCAAGGACATCAGTTTTTCCTGCAACTGGCTATAATCCAACTGAAGATTCTATAAGCCAAGATGTGATTGCAACTGTTGAGAAGAGTATGAAGAAATATACTGATAACCTAATGCGATTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTGTATTGCTATAATCTTGACAAATCTATTGGAGAAATTAGATCTGATTTAAATCGTGATCACGGGGAGCAGGATTCAAAGCTTAAATCTCTTGAAAAGCATGTTCAGGAAGTTCACAGGTCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCAAGCCATTCACAGTCTAATGAGGACAGATCTACACCTTCTACTACAGATCCTAAAAAAACTGATAATGCATCTGATGCGAACAACCATCAGTTAGCTCTTGCCCTGCCTCATCAAGTTGCTCCTCAGGTGCAGCCTGCAGGACCCCCGCCTCAAGCTCAACCACCAAATGTGAATCAACCCACTCAACAACCTGCTTATTACATGCAGGCTGCCCCTACAGCATCTCAGCTACCCCAGAATCAGTATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAACAAGACATGTCCCGGGTGGCTCAACAACCAACACCATCACAAATAAACCCTCCCACACCTGTGCAACAATTTTCACATTACCAGCCGCAGCCGCCGCAGCAGCAGTGGCCTCAGCAGGTGCAACAATCCTCAATGCAACCTCAAATGAGACCCCCCTCACCTACTGTGTATCCTCCATACCAACCAAACCAAACACCAAATCCATCACCCACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCGCAACCAGGATCCAGCCGTGCTGATTCCATGCAATATGGATATGGTGGAACTGGTAGAACAGTTCAGCAACCTCCACCCCAGCAAATCAAGGGCTCATTCTCTTCACAACCTAGTGATGCATATGGAGCTAGCGGGACCCACCCTCCTCCTGGTAATGCATACATGATGTATGATGGTGGTGAGGGAGGAAGGACACAACATCCACCACCACAACCCTCTCATTTTGCTCAATCTGGATATCCTCCAACAGGTGCTTCCCTTCAGAACCCCAATCTCATGGTCCGAAATCCTAGCCAGTCACAGTTTGCACGCAACCATCCTTACAATGAGTTGATTGAGAAATTGGTGAACATGGGATTCAGGGGCGACCACGTGGTGAGCGTGATCCAAAGGATGGAGGAGAGTGGACAGACCATAGATTTCAACTCTGTTCTTGACAGGTTGAATGTGCATAGCTCTGTTGGTCCCCAGAGAGGAGGGTGGTCAGGGTGA 1572 0.4656 MASGSSGRGGNPGSKGFDFASDDILCSYDDFSNRDSNSNGNHTDSTKDFQKSRVARTSVFPATGYNPTEDSISQDVIATVEKSMKKYTDNLMRFLEGISSRLSQLELYCYNLDKSIGEIRSDLNRDHGEQDSKLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDRSTPSTTDPKKTDNASDANNHQLALALPHQVAPQVQPAGPPPQAQPPNVNQPTQQPAYYMQAAPTASQLPQNQYMPSDQQYRTPQLQQDMSRVAQQPTPSQINPPTPVQQFSHYQPQPPQQQWPQQVQQSSMQPQMRPPSPTVYPPYQPNQTPNPSPTETLPNSMPMQMPYSGVPQPGSSRADSMQYGYGGTGRTVQQPPPQQIKGSFSSQPSDAYGASGTHPPPGNAYMMYDGGEGGRTQHPPPQPSHFAQSGYPPTGASLQNPNLMVRNPSQSQFARNHPYNELIEKLVNMGFRGDHVVSVIQRMEESGQTIDFNSVLDRLNVHSSVGPQRGGWSG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01064 523 MobiDBLite consensus disorder prediction 219 234 - -
Tsu06g01064 523 Pfam UBA-like domain (DUF1421) 468 512 IPR010820 -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 323 345 - -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 346 402 - -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 217 239 - -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 167 201 - -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 255 453 - -
Tsu06g01064 523 Coils Coil 134 170 - -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 430 453 - -
Tsu06g01064 523 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 521 - -
Tsu06g01064 523 MobiDBLite consensus disorder prediction 255 322 - -
Tsu06g01064 523 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01064 Tsu-Chr6 9696526 9700344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01064 467 508 Trihelix Transcription Factor Family AT5G14540 42.857 5.71e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01064 - - gmx:100782994 677.552