Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01043 atggcaaagaagaagaagagttggTTTAATCTTGTGAAGAGACTTTTCATATGGGATACACATTCAACACAAGagaagAAGGAGAAAAGAAGGAAATGGATATTTGGAAAGTTAAGGACAAAGAAGTTACCTTCAATTACAGCTCCACCAACAACATTAAAAGAAACAGAACAAAATGAAGCAGAGGAGGAAAAAACCAAACATTCTGAATCAGCAGTAACTGCTGAAGTTGTTATTCTAAGTGGTGTTTCAAAAGATAATTCAGCAGAATCTGAACCTTTTGAAACTGTTAATGGTGTTTCTCAATCAATATATAAGTGCCAGAAAGAGATTCAAGAATTTGCAGCTATCAAAATTCAAACTGCCTTTAGGGGTTACCTAGCAAAGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAACTTCAAGCTATCATTCGCGGTCGAGCAGTGAGACGCCAAGCTATGAGTACTCTTAAGAGCTTACAATCCATTGTAAGTATCCAATCAAAGATATGTGCAAGGAGACTGCAAATGGCTGAAGGTAGATGGGAGGAttgtgttgaagatgaagaCATGCATTATTCTAAAGATAAGATAATTAGGaTGGATTCAAACAGTGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGTAGATGCTTCTTGCATGATCAAGAAAGAAGCCATTATTAAAAGAGAAAGAATAAAAGAATACACATTTAATCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTGAATGGAAGATGGAGATACTGGCTGGAGCAATGGGTAGATACACAACTTACAAAAAGCAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCAAATTCTAAAACTGGCGAAGAATTTGGAACAAGACAACTTAAGCTGAAAAGTACTACTACTCAGagacaaaatcaaaatccactTGAAGGATTGGAATCACCAATACTTTTATCAAGAAAAACTTTTCCTCACAGGAGACAATGTTCAATAGAAGATCAATCATTTTCAAGCTCTCCTGCAACACCAGCATACATGGCGGCTACTGAATCAGCAAAAGCAAAAGCAAGATCAACAAGTTCACCAAAAGCAAGATCATGGAATTATGACATGAACTCAGATAGCTATTTATCACCTTGCaagaaaaaattatcaattgtTTCATCTATTAACAGTGATGTGCTTAATAGTGGTGGTAGAATGGGAAAACTTAGTGGTAGTAATCAACAAAGATCTCCAAGTCTTAAGGGTATTTCAGTGCCTATAAAATCAAGCAGGACTATAATAAAGGATCTTAGTATTAATTCAGATTGTTCATTGCCTAATTGGGATAGACAAAGTTCATTCAGATGA 1368 0.3399 MAKKKKSWFNLVKRLFIWDTHSTQEKKEKRRKWIFGKLRTKKLPSITAPPTTLKETEQNEAEEEKTKHSESAVTAEVVILSGVSKDNSAESEPFETVNGVSQSIYKCQKEIQEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSKICARRLQMAEGRWEDCVEDEDMHYSKDKIIRMDSNSERKWDDSTLLKEEVDASCMIKKEAIIKRERIKEYTFNHRRSAESERSKVNGRWRYWLEQWVDTQLTKSKELEDLDSVFSSNSKTGEEFGTRQLKLKSTTTQRQNQNPLEGLESPILLSRKTFPHRRQCSIEDQSFSSSPATPAYMAATESAKAKARSTSSPKARSWNYDMNSDSYLSPCKKKLSIVSSINSDVLNSGGRMGKLSGSNQQRSPSLKGISVPIKSSRTIIKDLSINSDCSLPNWDRQSSFR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01043 455 Pfam Protein of unknown function (DUF4005) 337 410 IPR025064 -
Tsu06g01043 455 Gene3D - 110 164 - -
Tsu06g01043 455 PANTHER IQ-DOMAIN 5-RELATED 6 441 - -
Tsu06g01043 455 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Tsu06g01043 455 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Tsu06g01043 455 MobiDBLite consensus disorder prediction 403 425 - -
Tsu06g01043 455 MobiDBLite consensus disorder prediction 45 67 - -
Tsu06g01043 455 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Tsu06g01043 455 PANTHER IQ-DOMAIN 11 6 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01043 Tsu-Chr6 9513071 9517063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01043 4 455 IQD Protein Family AT5G13460 47.699 1.18e-115 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01043 - - gmx:100800192 653.669