Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01018 ATGTCTAATATTTGCAGTCATCAAAATGTTGTTACCTTAGATGTCCATGCTACCAAAAATCTGTTACATTCATCTGGTTACAAATATCTTGATGTGAGGTCAGTGGAGGAATTCAATAAAAGTCATGTTGAGAATGCTATTAATGTTCCCTATATGTTCAAAACAGAAGAAGGCCGTGTGAAAAATCCGGATTTTGTTAACCAAGTAGAAGCAATATGCAAGAGTGATGATCATTTAATTGTGGCTTGCAATGCTGGAGGAAGATCAAGTCAAGCTTGGGTTGATCTCAATGATTTTGGATTTAAACATATTGTTAACATGGGAGGAGGCTACTCTGCATGGGTGGACGCTGGATTTGCAGGTGATCACAAACCTGCACAAGAACTCAAAACAGCTTGCAAGTTCCGtccataa 414 0.3792 MSNICSHQNVVTLDVHATKNLLHSSGYKYLDVRSVEEFNKSHVENAINVPYMFKTEEGRVKNPDFVNQVEAICKSDDHLIVACNAGGRSSQAWVDLNDFGFKHIVNMGGGYSAWVDAGFAGDHKPAQELKTACKFRP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01018 137 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 135 IPR044684 GO:0003824
Tsu06g01018 137 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Tsu06g01018 137 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 119 IPR036873 -
Tsu06g01018 137 Gene3D - 2 120 IPR036873 -
Tsu06g01018 137 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 135 - -
Tsu06g01018 137 SMART rhod_4 13 120 IPR001763 -
Tsu06g01018 137 Pfam Rhodanese-like domain 19 116 IPR001763 -
Tsu06g01018 137 CDD RHOD 19 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01018 Tsu-Chr6 9262608 9265721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01018 1 119 Sulfurtransferasese or Rhodanese AT5G66170 43.802 9.14e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01018 K22547 - gmx:100794624 218.009