Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01015 ATGCAGAAACAAGAtgttagagaagaagaaaaaaaaagtgacaaaaaaggagagaaaaatgACCAACCACCATTAATGGCATTAAACCATATTTCAAGGCTATGTAGAAATGTGAAGGAGTCTATAGACTTTTATACAAAGGTGTTGGGATTTGTTTTGATTGAGAGGCCTCCAGTTTTGGATTTTGAAGGTGCTTGGTTGTTTAATTATGGAGTTGGGATTCATTTGGTGCAGTctaaagaagaagagaaattaccTGATACTCAACATGACTTGGATCCTCAAGACAATCATATATCTTTTCAGTGTGAAGATGTAGAAAGGATGGAGAAAAAGTTGAAGGAGATGAATGTGAAGTATAAGAAAAGAACTCTAGATGCAGAAGATGGAACAATGATGGATCAACTTTTCTTTAATGACCCAGACGGATTCATGGTGGAAATATGTAACTGTGAGAATTTAAAACTCATTCCTGCTAATTCACGAGCTAATTCACGAGGCAAGATAAAGCTTCCAACGGATCGCCACACACCACCCGTGGAGACAGCCAATAAAAACGAGCATgataatgaaaaataa 579 0.3282 MQKQDVREEEKKSDKKGEKNDQPPLMALNHISRLCRNVKESIDFYTKVLGFVLIERPPVLDFEGAWLFNYGVGIHLVQSKEEEKLPDTQHDLDPQDNHISFQCEDVERMEKKLKEMNVKYKKRTLDAEDGTMMDQLFFNDPDGFMVEICNCENLKLIPANSRANSRGKIKLPTDRHTPPVETANKNEHDNEK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01015 192 PANTHER EXPRESSED PROTEIN 11 187 - -
Tsu06g01015 192 MobiDBLite consensus disorder prediction 1 25 - -
Tsu06g01015 192 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 22 150 IPR029068 -
Tsu06g01015 192 MobiDBLite consensus disorder prediction 166 192 - -
Tsu06g01015 192 Coils Coil 103 126 - -
Tsu06g01015 192 MobiDBLite consensus disorder prediction 1 21 - -
Tsu06g01015 192 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 151 IPR037523 -
Tsu06g01015 192 PANTHER - 11 187 - -
Tsu06g01015 192 MobiDBLite consensus disorder prediction 168 192 - -
Tsu06g01015 192 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 28 148 IPR004360 -
Tsu06g01015 192 CDD VOC_like 28 148 - -
Tsu06g01015 192 Gene3D - 29 151 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01015 Tsu-Chr6 9225583 9228489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01015 39 161 Calmodulin-binding Proteins AT1G08110 25.000 5.00e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01015 - - aip:107629668 270.396