Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g01015 | ATGCAGAAACAAGAtgttagagaagaagaaaaaaaaagtgacaaaaaaggagagaaaaatgACCAACCACCATTAATGGCATTAAACCATATTTCAAGGCTATGTAGAAATGTGAAGGAGTCTATAGACTTTTATACAAAGGTGTTGGGATTTGTTTTGATTGAGAGGCCTCCAGTTTTGGATTTTGAAGGTGCTTGGTTGTTTAATTATGGAGTTGGGATTCATTTGGTGCAGTctaaagaagaagagaaattaccTGATACTCAACATGACTTGGATCCTCAAGACAATCATATATCTTTTCAGTGTGAAGATGTAGAAAGGATGGAGAAAAAGTTGAAGGAGATGAATGTGAAGTATAAGAAAAGAACTCTAGATGCAGAAGATGGAACAATGATGGATCAACTTTTCTTTAATGACCCAGACGGATTCATGGTGGAAATATGTAACTGTGAGAATTTAAAACTCATTCCTGCTAATTCACGAGCTAATTCACGAGGCAAGATAAAGCTTCCAACGGATCGCCACACACCACCCGTGGAGACAGCCAATAAAAACGAGCATgataatgaaaaataa | 579 | 0.3282 | MQKQDVREEEKKSDKKGEKNDQPPLMALNHISRLCRNVKESIDFYTKVLGFVLIERPPVLDFEGAWLFNYGVGIHLVQSKEEEKLPDTQHDLDPQDNHISFQCEDVERMEKKLKEMNVKYKKRTLDAEDGTMMDQLFFNDPDGFMVEICNCENLKLIPANSRANSRGKIKLPTDRHTPPVETANKNEHDNEK | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g01015 | 192 | PANTHER | EXPRESSED PROTEIN | 11 | 187 | - | - | |
Tsu06g01015 | 192 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Tsu06g01015 | 192 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 22 | 150 | IPR029068 | - | |
Tsu06g01015 | 192 | MobiDBLite | consensus disorder prediction | 166 | 192 | - | - | |
Tsu06g01015 | 192 | Coils | Coil | 103 | 126 | - | - | |
Tsu06g01015 | 192 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tsu06g01015 | 192 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 27 | 151 | IPR037523 | - | |
Tsu06g01015 | 192 | PANTHER | - | 11 | 187 | - | - | |
Tsu06g01015 | 192 | MobiDBLite | consensus disorder prediction | 168 | 192 | - | - | |
Tsu06g01015 | 192 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 28 | 148 | IPR004360 | - | |
Tsu06g01015 | 192 | CDD | VOC_like | 28 | 148 | - | - | |
Tsu06g01015 | 192 | Gene3D | - | 29 | 151 | IPR029068 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g01015 | Tsu-Chr6 | 9225583 | 9228489 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g01015 | 39 | 161 | Calmodulin-binding Proteins | AT1G08110 | 25.000 | 5.00e-08 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g01015 | - | - | aip:107629668 | 270.396 |