Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00991 ATGTATATGTTTTTCTTCGGCGCATGGGCAATAGCTTTTAGATCACCCAAGCTTGCTGGAATGCTTCCACTCAAGTCATTTTTGGAAAGGTCGAGGACTTGCAATGAGCCTAGTTTTGAAAGATTAGACGACAATTCACCGGAAAATGCATTAGACCTCAAAATAAGAATTCTTAGAAACGGAAAACCTTTTAGGGAAATTGTCCCAATTCCTGACTCTGGATGCAACGTCCAAGCTTTTAGGGAAATTGTCCCAATGAAGAAATTAAGAAGTGATCGATCAAAGAGAAGAGATTGCAACATTCTATCTTCAAAGTTCAAGGTTACTTCTTGTACAAGCAACAATGAAGATGGTGGAAAGATAACAGTCAAGGAAAAAACAAGTGAAGGAATCAAGAatatcaagaaaagaaaagtaatgGCTGAGGGACCAAGAAATTTGTCGAAGAAATGCAAGAAGGAGAATGAAGAGGTGCAAGAAGAGCAACCCGATCTTCCGTTGgtgtttaaagaaaaaattgaacaaatggAAGGTAATGATGTGAAGTTGGTGATCCAGAAGAGATTGACTATGACTGACGTGACACGAAACAACGGTCGATTATCCGTTCCAATAGGTAAGAAGATCGAAAAGAGTAGTCTTTTGACACAAGAGGAGGGAATGTATTTGGATTATGTGCCTCAAAAGAAAGGGACGCGAAAGCTTGATGGTATGTCTGTATCTATGTTGGATACTAATCTTAAACTTTGGGATGACATGTGCTTCAAGAAATGGAAAATGGGGAAATCCGAGGTCTTCAATATCACGGGTGGATGGTACAAACTTGTAGTAGAAAACCATTTGGAACATGATCAAAAGATACaactttggtcttttaaaaGAGACAATCATCTCAATTTCGCACTCGTCAAACTTTAG 918 0.3671 MYMFFFGAWAIAFRSPKLAGMLPLKSFLERSRTCNEPSFERLDDNSPENALDLKIRILRNGKPFREIVPIPDSGCNVQAFREIVPMKKLRSDRSKRRDCNILSSKFKVTSCTSNNEDGGKITVKEKTSEGIKNIKKRKVMAEGPRNLSKKCKKENEEVQEEQPDLPLVFKEKIEQMEGNDVKLVIQKRLTMTDVTRNNGRLSVPIGKKIEKSSLLTQEEGMYLDYVPQKKGTRKLDGMSVSMLDTNLKLWDDMCFKKWKMGKSEVFNITGGWYKLVVENHLEHDQKIQLWSFKRDNHLNFALVKL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00991 305 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 95 305 - -
Tsu06g00991 305 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 95 305 IPR005508 GO:0003677
Tsu06g00991 305 Gene3D - 174 302 IPR015300 -
Tsu06g00991 305 Pfam B3 domain-containing protein At2g31720-like 171 276 IPR005508 GO:0003677
Tsu06g00991 305 SUPERFAMILY DNA-binding pseudobarrel domain 184 301 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00991 Tsu-Chr6 9026172 9027089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00991 169 302 B3 DNA Binding Superfamily AT1G05930 24.444 1.04e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00991 - - mtr:MTR_5g092880 182.57