Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00976 atggataataattttctttcacAACCAACAACTATAGCACTAACTATTGTTTTAGTGCTTACTCTATACAACATATGGAGGATAAAAAAACCTAGTAACAAATCTAAGGGTATGAAACCACCAGAACCATCATATGCCTTACCTTTAATAGGTCACCTCCATCTACTAGGAAACCAAACCCCCCTTGCAAGAATCTTTGCTTCTATTTCAGACAAATATGGTCcaattttccaaatatatttagGAGCATACCCTGCCCTTATTATTTCAAACCAAGAAGCAATCAAAGAATGTTTCACAACAAATGACAAAATCTTAGCTTCAAGACCAAAGTCAAGTCATGGAATCTACCTTGGTTATAACTATGCTGGCTTTGGTTTTGCACCTTATGGCCCATATTTTAGTAAGCTAAGAAAATTAACCATGCTTGAATTACTCTCGTCTCGTCGCATCGAATTGTTGAGACATGTTTACGAATCGGAGATCGATACTTTTATTAAGGATCTATTCTTGTATGTTAAGGTTGGAAAGGTTAAGGTTGTGATTAGTGAATGGTTGGAAAGATTAACATTTAATATAATCACAAAGATGATTTGTGGGAAAAGGTATTTTGAGTATTTACAAGATgtggatgatgaagaagcacATGGTAATATTGTAAAACTTATAAAAGATTTTATGCATATTTCTGGTGAGTTTGTTCCTAAGGATTTGATTCCAATTCTTGGTTGGTTTGGTTATCAAGGACAAGTTCTTAAATCTATGAAAAGAATTGCTAAAGATTTGGATACACTTGTTGGAAGTTGGGTTGAAGAACATGTTGAGAAGAGTAAAGATGAAGTGAATGATTCAAATGAGaaacatgattttattgatgTGATGCTTTCTGTGATTGAAGATGATCCTGCTTCTGGTCATAATCGTGATACTATCATCAAGGCAAATGTTATGAATCTTATGCTAGCTGGCTCAGACACAACATCAACGACAATGACATGGATCCTAGCCATATTGTTGAATAATATGAATGCTTTAAAGCATGCACAAGAGGAGATCGACCATCACATAGGCAAGGATAGAAGGGTAGAATCATCAGACACAAAAAACCTAGTTTATTTACAAGCAATTTTCAAAGAAACATTGAGGTTATACCCACCAGGCCCAGTATTAGTACCCCACGAAGGTACCGAAGATTGTTACATTCAAGGCTATTATGTTCCGAAAGGGACACGTGTGTTCGCTAACGTGTGGAAATTACATAGAGATCCAAGTATTTGGTCAGAGCCTGAAAAGTTTTTTCCAGAGAGATTTATTAATGAAAATGGAGAAATTGATCATGAAAGTCATCATTTTGAGTACCTTCCTTTTGGATTAGGGAGAAGAGCTTGTCCTGGATCTATATTTGCTACACAACTTAGTCTCATTACACTTGCTCGTTTGCTTCATGGATTTGATTTGGAACTGCCATTGGATGAAGCTATTGATATGAGAGAAGGGTTAGGTATAACCTTGCCTAAGTTAACTCCATTGCAACTTGTTTTGACCCCACGATTACCCTATGAACTCtatcaatga 1575 0.3429 MDNNFLSQPTTIALTIVLVLTLYNIWRIKKPSNKSKGMKPPEPSYALPLIGHLHLLGNQTPLARIFASISDKYGPIFQIYLGAYPALIISNQEAIKECFTTNDKILASRPKSSHGIYLGYNYAGFGFAPYGPYFSKLRKLTMLELLSSRRIELLRHVYESEIDTFIKDLFLYVKVGKVKVVISEWLERLTFNIITKMICGKRYFEYLQDVDDEEAHGNIVKLIKDFMHISGEFVPKDLIPILGWFGYQGQVLKSMKRIAKDLDTLVGSWVEEHVEKSKDEVNDSNEKHDFIDVMLSVIEDDPASGHNRDTIIKANVMNLMLAGSDTTSTTMTWILAILLNNMNALKHAQEEIDHHIGKDRRVESSDTKNLVYLQAIFKETLRLYPPGPVLVPHEGTEDCYIQGYYVPKGTRVFANVWKLHRDPSIWSEPEKFFPERFINENGEIDHESHHFEYLPFGLGRRACPGSIFATQLSLITLARLLHGFDLELPLDEAIDMREGLGITLPKLTPLQLVLTPRLPYELYQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00976 524 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 523 - -
Tsu06g00976 524 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PANTHER CYTOCHROME P450 82C3-RELATED 15 523 - -
Tsu06g00976 524 Pfam Cytochrome P450 41 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 SUPERFAMILY Cytochrome P450 40 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Tsu06g00976 524 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00976 524 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00976 Tsu-Chr6 8863815 8866659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00976 41 523 Cytochrome P450 AT4G31940 46.856 3.69e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00976 - - gmx:100790675 787.719