Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00970 ATGAAACTAGAATCTTCTTCCATACAAACATTCTGTCGAGTGCCACACCAACAAAAACCGATCTGGTCAACcaTGGCGGAAGTTCAAGAGTCTCAACCTCAATCAACACTAGGTAAAGAAAATGCAGATGAAGTGGTTGATGAAAGTTCTGAATATGGTAAAGGGGAAACACCACAAGAATTATTGAGTAGTCCTCCAAAAGTGGATTCTGAAGTTGAAGTTCTTCATGAGAAGGTtactaaacaaataattaaggaAGGTCATGGTCAAAAACCTTCTAAGTATTCAACATGTTTTTTCCATTACAGGGCGTGGGCTGAGAACACGGAGCACAAATTTGAAGATACATGGCAGGAGCAACGGCCAACTGAGATGATAATAGGAAAAGagaagaaagaaatgaCTGGTTTGGGCATTGGGGTGGCAAGCATGAAAGCAGGGGAGCGAGCATTGCTGCGTGTGAGCTGGGAATTAGGATATGGAAAGGAAGGAAGCTTTTCTTTTCCAAATGTTCCACCCATGGCAGATTTGGTTTATGAAGTTGAACTCATTGGTTTTGATGAAACAAAAGACGGAAAAGCTCGTAGTGATATGACTGTGGAGGAGAGGATTGGTGCAGCTGATCGAAGAAAGATGGACGGAAATGTTCTGTTTCAGGAAAATAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCTATAGCTTATATGGGAGATGACTTCATGTTCCAGTTATTTGGGAAGTATAGGGATATGGCATTGGCTGTAAAGAATCCGTGTCATCTTAACACGGCAGCCTGTCTGATTAAGCTGAACCGGTACGAAGAAGCTATAGGACAATGCAGCATTGTATTGAGTGAGGATGAGAACAATTTGAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCAGCACTTGGGCAGACAGATGCTGCCAGGGAAGATTTTCTAAAAGCGCGTAAACATGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAAATTACTTGCTGAACATGACAAAGCTATTTATCAAAAGCAGAAAGAGATCTATAAAGGAATATTTGGACCAAGACCTCAACCAGTACCTAAGAAAAGGAATttgcttttacttgtttggCAGTGGTTGGTTTCAGTATTTTATAGCTTTATCACACTCTTCAACCGCGAAAAGAACAAATCTGACTAA 1185 0.3966 MKLESSSIQTFCRVPHQQKPIWSTMAEVQESQPQSTLGKENADEVVDESSEYGKGETPQELLSSPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWAENTEHKFEDTWQEQRPTEMIIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDENNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIFGPRPQPVPKKRNLLLLVWQWLVSVFYSFITLFNREKNKSD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00970 394 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 95 187 IPR001179 GO:0003755
Tsu06g00970 394 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 55 355 - -
Tsu06g00970 394 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 55 355 - -
Tsu06g00970 394 SUPERFAMILY TPR-like 199 351 IPR011990 GO:0005515
Tsu06g00970 394 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 91 184 IPR001179 GO:0003755
Tsu06g00970 394 Gene3D Tetratricopeptide repeat domain 189 320 IPR011990 GO:0005515
Tsu06g00970 394 SMART tpr_5 207 240 IPR019734 GO:0005515
Tsu06g00970 394 SMART tpr_5 292 325 IPR019734 GO:0005515
Tsu06g00970 394 SMART tpr_5 258 291 IPR019734 GO:0005515
Tsu06g00970 394 Gene3D - 63 188 IPR046357 GO:0003755
Tsu06g00970 394 SUPERFAMILY FKBP-like 65 186 - -
Tsu06g00970 394 ProSiteProfiles TPR repeat profile. 292 325 IPR019734 GO:0005515
Tsu06g00970 394 MobiDBLite consensus disorder prediction 26 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00970 Tsu-Chr6 8823820 8831317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00970 72 360 Calmodulin-binding Proteins AT5G48570 33.108 2.14e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00970 - - gmx:100790587 651.358