Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00964 ATGGCAATAGCATTAACACAATGCTCAGAAAAGCTAGGATACCTCATATTTCTTTTAGGCAAAAACTTCGCCATGTTTACGGCGATGGTGATTGCATGCAATGGTTTACATTTTCTACTAAAGCCTTATCAACAACCCCGAATTACTTCGGACATAATTGTTGGACTAGTTGTGGGAAATACGCCATTTTTACGCGAACTATATGGACAATTCAATCGTACATTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTGTAGAAATGGATCCTTATGTACTCTTCAAAAGACCAAGTAGAGATGTTCAAGTTGCATATGCAGGAATAATCATAACATTCATCCTAGCAGTAGCCATAACACCCTTTCTCCATTACTTCACAAATGACACGCAATCGCATTTAGTAGAATTCACTCTCGCCCTCTCAATTCTACTCTCAAGTACAGCATCGCCTGTCCTAACCCGTCTAATAACAAGTCTCAACATAGGAAAGTCGGATATTGGGAAACTTGTCATAGCAGCAGGGATGTATTCGGATTTTCTCAGCTCTTTGGTTCTTTCAGTCGGCTACATTTCAATGCCGTTGGACACATTTTGTGacaatattgaaaaaaaaggaCGTTTAAAACGAGCGATTGTAATGAATAGTGCTGTTCTTGGCCAAGCATTGTTCACAGCAACCGTTTCGCCACTTTTCATGAGATGGGTTAACAATGAAAATCCAGAAGGGAAACCTATGAAAGGCTCACATTTAGTATTATCAATAGCATTCATGGTAATGAGTTGTGCTTCATCAATACTATATAATTATAGTCCAATTCTAAGTGCATTTATAACTGGAATTTGTTTTCCTAGAGAAGGAAGAGTTTCCAAATGGGTTATTAGCAAAATCAATTACTTGTTAACAACTATATTTTTTCCAATATTTTTCTTGTGGATGGGTTATGCAGCTGATTTTAGGCAGTTTCAACCTACACAATTAGGAACATGGGGAAGATTATTTATACCTGTCTTAATTGTAATGGGAGGTAAAATTCTTGGAACACTTATTTGTGGTGCAATTCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGCTACTTGCTACCAAGGGACATTTTCATATCTACATGGCTATCAAAATGGGTTGTGGCTCCAATACTTCGGCCGGCATTGCATTGATAATCGCAATATTTTTTACAGTGGTGCATGCCCCGCCCGTCGTAGCACATATCATCAAACGAGCCAAGAGAAAAGTACCTACTCATCGCATGTCCCTTCAATTGCTTGATCCATCAAGTGAGCTAAGGATTCTGCTATGCCTTCATGGACCTGATAATATTTCAGCTTCCATCAACTTCATGGAGATCACAAGAGGAAAATCAGATCCCGGCATTCTTGTATATGTCACGGAAATGATTGAACTAACCAATCAAATAGCAGTCACAGTAGAAAGAGGTGAAGGAATAGAAACAACAAATGTAAAAGACAAGGATGTCATGGAGATGAGAGACACAATAACTAGCTCATTTCAAGCTTATATAGACGATGACGGTGATGGTGTTACGCTCAAAAGAACAATGGCGGTGTCGACAATTAATAACATGGCCCAGGACATATGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCATTCTACCATTTCATAGGAGGCAATGTGTGGATGGAAAATTGGATGGTGGCAATCAAGGATTCAGATATGTGAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTAAACAGAGGCTTAGGGTCCATTGAAAAGATATCAAAGACTCATGTATCACTCAATGTTGCAACAGTGTTCATTGGTGGAAAAGACGATAGGGAAGCACTTGCCTACACCGGTCGCGTAGCAGGGCATCCAGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTTCGGCATATAGGGTAAGCCTTCCAGATAACGGTGAGGAGATGGGGCTAGACGATGAATGCTTTGCACATTTCTATGATAAATATATTTCTGGAGGTCGAATTTCGTATATGGAGAAACATCTTGCTAATGCAGCCGAGACTTTCTCTACTCTCAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAGAGAAGGTGGACTGAACTCGATATTGACAAAGGGAATGAATGATTGGCAACAGTGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCGGACTTCTCAAAAACAGTGTCAGTGTTAGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGTCTTGATGAAGAATTCAATATCATGTAG 2364 0.3934 MAIALTQCSEKLGYLIFLLGKNFAMFTAMVIACNGLHFLLKPYQQPRITSDIIVGLVVGNTPFLRELYGQFNRTFGFIIDFGMMCYMFALGVEMDPYVLFKRPSRDVQVAYAGIIITFILAVAITPFLHYFTNDTQSHLVEFTLALSILLSSTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFLSSLVLSVGYISMPLDTFCDNIEKKGRLKRAIVMNSAVLGQALFTATVSPLFMRWVNNENPEGKPMKGSHLVLSIAFMVMSCASSILYNYSPILSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGYAADFRQFQPTQLGTWGRLFIPVLIVMGGKILGTLICGAILGFHWPESVAIGLLLATKGHFHIYMAIKMGCGSNTSAGIALIIAIFFTVVHAPPVVAHIIKRAKRKVPTHRMSLQLLDPSSELRILLCLHGPDNISASINFMEITRGKSDPGILVYVTEMIELTNQIAVTVERGEGIETTNVKDKDVMEMRDTITSSFQAYIDDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIILPFHRRQCVDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSIEKISKTHVSLNVATVFIGGKDDREALAYTGRVAGHPGVKLTVIRFLVDTSVESSRISAYRVSLPDNGEEMGLDDECFAHFYDKYISGGRISYMEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00964 787 Pfam Sodium/hydrogen exchanger family 30 418 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu06g00964 787 PANTHER CATION/H+ EXCHANGER 3 4 785 - -
Tsu06g00964 787 Gene3D - 21 428 IPR038770 -
Tsu06g00964 787 PANTHER CATION/H + ANTIPORTER 4 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00964 Tsu-Chr6 8769326 8772822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00964 25 787 Antiporter Super Family AT3G52080 49.744 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00964 - - gmx:100815945 1164.83