Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00951 ATGTCCAACCATAGCCATAGCCATAACCATTATCATAATCATACATTTACAATTTCATCAACCttattgatatttttgttgctaaatCTATGTCAAATCACAACAAGCCTAACACAATTTGAAGCGTTGCTAAATTGGAAACAAAGTCTACCTCCACAATCAATTCTTGATTCATGGATCATTAACAACTCAAGTTCAACACAAACACCATGTTCATGGAGAGGTATAACTTGTGATTCAAAAGGAAGTGTTACAATcataaaattagcttatacTGGACTTGAAGGTACTCTTAATCACTTAAACTTATCCGTTTTTCCAAACCTTCTTCGTCTTGATCTTAAAACAAATAATCTTACCGGCATCATACCTGAAAACATCGGCGTTCTTTCAAAACTTCAATATCTTGATCTTTCTACTAATTATCTCAATGGAACTTTACCTCTTTCTATAGCTAATTTGACTCAAGTTTACGAGCTTGATGTCTCGAGAAACGATGTATCAGGTATACTAGACCGTCGTTTGTTTCCTGATGGTTCTGATAAGCCTAGTTCCAGAACTGGGCTTATGGGCATCAGGAATCTTCTTTTCCAAGATACCCTTTTGGGCGGTCCACTTCCGATCGAAATCgggaatataaaaaatttgacttTACTAGCTCTTGATGGAAACAACTTTTCTGGGCCAATTCCTTCATCTTTAGGAAACTGTAAACATTTAAGCATTCTTAGATTAAATGAAAATCAATTCTCTGGTCCAATTCCACCAAGTATTGGAAAATTAACCAACTTAACTGATCTTAGATTTTTTACCAACAACTTAAATGGTACTGTGCCACAAGAATTTGGAAACCTTTCATCTTTGATTGTGTTGCATCTTGCTGAGAACAATTTCATTGGTGAGTTACCACCAGAAATTTGCAAAAGTGGTAAACTTGTTAATTTCAGTTCAGCTTATAACAGTTTCACTGGTCCAATTCCAAGAAGTCTTAGAAATTGCCCTTCTTTGTATAGAGTTAGAATGGAATACAACGAGTTAACCGGTTATGCAGATCAAGATTTCGGAGTTTATCCGAATCTTACTTACATTGATTTCAGCTATAATAGTGTTGAAGGTGGTTTATCTTCTAAATGGGGTTCATGCAAAAACTTGCAATCACTCAAAATGGCGGGGAATTCGGTTAATGGAAAAATTCCAAGTGAGATTTTTCATTTGGATCAATTACAAGAGCTTGATCTATCATTTAACCGATTATCGGGAACTATTCCTTCACAAAttggaaattcttcaaatttgtCTAACTTAAATTTGAATGGAAATAGCCTTTCTGGTAAGATACCTGTTGAAATCGGAAAGCTTTCGAATTTACAAACTTTAGACCTTTCAATGAACGCGTTGTCCGGAGAAATTCCAGCTCAGATAGGAGATTGTTCGaatttgttgaatttgaatttgagtaACAATCATTTAAATGGAACAATTCCTTTCCAAATTGGCAATCTTGGTTCATTACAAGATTTTTTGGATTTGAGTTACAATTCGATTTCGGGGGCAATTCCTGGTAATATCGGTAAGCTTTCGAGTTTGATAAGCTTAAACATCTCAAACAATAATTTATCAGGTAAAATTCCTGATCAAATTAGTGGAATGTTGAGTTTATCAAATCTTAATCTCTCTAACAATCATTTGGAGGGTAATGTTCCTAAAGATGgcattttcaaattgaactcttCTAATTCACTTGATTTGAGCAATAATCAAGGGCTATGTGGTAATTTCAATGGCTTGAAACCTTGCAATGTTTCACTCATTAAGCCTAATGGTGATggaagtaacaaaaaaaaagttgtgatTCCAATTGTTGCTTCTTTAGGAGGTGCACTTTTTCTTTCATTGATAATTGCTGGCATAATCTTGTTATGCTACAAGAGAAAATCAAGAACTACAAGAACAAAGTCTTTATTAGATACACCAAATCCATTTTCAATTTGGTATTTCAATGGAAGAGTTGTGTACGGCGACATAATCGAAGCTACAAACAATTTCGACGACAAGTATTGCATAGGCGAAGGAGCGTTCGGGAATGTTTACAAAGCTGAATTGAAAGGAGGTCAAATATTCGCGGTGAAAAAGTTGAAATGCGATGAAGAGAATTTAGACAAAGAAAGTATAAAAACATTTGAAAGTGAAGTTGAAGCGATGACAGAAACAAGACATAGAAATATTGTGAAGCTTTATGGATTTTGTTGTGAAGGGATGCATACATTTCTTGTTTATGAGTATATGGATAGAGGAAGTTTAGCTGATATGTTGAATGATGATAAGAAAGCATTGGAACTTGATTGGTTTAAAAGAGTTGAAATTGTTAAAGGTGTTGCAAGTGCTCTTTCTTATATGCATCATGATTGTTCTCCAATTTTGATTCATAGAGATATATCAAGTAAGAATATTTTGTTATCTATGGATCTTGAAGCTCATGTTTCTGATTTTGGTACTGCAAGGTTTCTTAAGCCAAATTCACCTATTTGGACTTCATTTGCTGGTACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACAGAGAAATGTGATGTATTCAGTTTTGGTGTTTTAGCATTTGAAATTCTAACAGGAAAACATCCTGGTGATCTTGTTTCTTACATACAAACATCTAATGATCAAAAGATAGATTTCAAGGAGATTTTAGACCCTCGCCTCGCTTCGCCTCCAAAGAACATTTTGAAGGAATTGGCATTGGTTGCCAATTTAGCTCTTTCTTGTTTACACACAAATCCTCAATCTAGACCAACCATGAGAAGCATTGCTCAGTTGTTAGAAATGGAGACTGCATTTAACACTTGA 2874 0.3351 MSNHSHSHNHYHNHTFTISSTLLIFLLLNLCQITTSLTQFEALLNWKQSLPPQSILDSWIINNSSSTQTPCSWRGITCDSKGSVTIIKLAYTGLEGTLNHLNLSVFPNLLRLDLKTNNLTGIIPENIGVLSKLQYLDLSTNYLNGTLPLSIANLTQVYELDVSRNDVSGILDRRLFPDGSDKPSSRTGLMGIRNLLFQDTLLGGPLPIEIGNIKNLTLLALDGNNFSGPIPSSLGNCKHLSILRLNENQFSGPIPPSIGKLTNLTDLRFFTNNLNGTVPQEFGNLSSLIVLHLAENNFIGELPPEICKSGKLVNFSSAYNSFTGPIPRSLRNCPSLYRVRMEYNELTGYADQDFGVYPNLTYIDFSYNSVEGGLSSKWGSCKNLQSLKMAGNSVNGKIPSEIFHLDQLQELDLSFNRLSGTIPSQIGNSSNLSNLNLNGNSLSGKIPVEIGKLSNLQTLDLSMNALSGEIPAQIGDCSNLLNLNLSNNHLNGTIPFQIGNLGSLQDFLDLSYNSISGAIPGNIGKLSSLISLNISNNNLSGKIPDQISGMLSLSNLNLSNNHLEGNVPKDGIFKLNSSNSLDLSNNQGLCGNFNGLKPCNVSLIKPNGDGSNKKKVVIPIVASLGGALFLSLIIAGIILLCYKRKSRTTRTKSLLDTPNPFSIWYFNGRVVYGDIIEATNNFDDKYCIGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDKESIKTFESEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDRGSLADMLNDDKKALELDWFKRVEIVKGVASALSYMHHDCSPILIHRDISSKNILLSMDLEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDQKIDFKEILDPRLASPPKNILKELALVANLALSCLHTNPQSRPTMRSIAQLLEMETAFNT 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00951 957 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Tsu06g00951 957 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 12 953 - -
Tsu06g00951 957 ProSitePatterns Tyrosine protein kinases specific active-site signature. 807 819 IPR008266 GO:0004672|GO:0006468
Tsu06g00951 957 Pfam Leucine rich repeat N-terminal domain 38 79 IPR013210 -
Tsu06g00951 957 Pfam Protein kinase domain 685 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00951 957 Gene3D Ribonuclease Inhibitor 180 304 IPR032675 -
Tsu06g00951 957 SUPERFAMILY RNI-like 81 303 - -
Tsu06g00951 957 Gene3D Transferase(Phosphotransferase) domain 1 762 956 - -
Tsu06g00951 957 SMART LRR_typ_2 285 309 IPR003591 -
Tsu06g00951 957 SMART LRR_typ_2 550 575 IPR003591 -
Tsu06g00951 957 SMART LRR_typ_2 526 549 IPR003591 -
Tsu06g00951 957 SMART LRR_typ_2 405 429 IPR003591 -
Tsu06g00951 957 SMART LRR_typ_2 453 477 IPR003591 -
Tsu06g00951 957 SMART LRR_typ_2 130 154 IPR003591 -
Tsu06g00951 957 SMART serkin_6 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00951 957 Gene3D Ribonuclease Inhibitor 37 179 IPR032675 -
Tsu06g00951 957 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 953 - -
Tsu06g00951 957 Gene3D Ribonuclease Inhibitor 319 601 IPR032675 -
Tsu06g00951 957 Gene3D Phosphorylase Kinase; domain 1 645 761 - -
Tsu06g00951 957 ProSiteProfiles Protein kinase domain profile. 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00951 957 PRINTS Leucine-rich repeat signature 408 421 - -
Tsu06g00951 957 PRINTS Leucine-rich repeat signature 453 466 - -
Tsu06g00951 957 SUPERFAMILY RNI-like 248 590 - -
Tsu06g00951 957 SUPERFAMILY Protein kinase-like (PK-like) 655 951 IPR011009 -
Tsu06g00951 957 Pfam Leucine rich repeat 407 466 IPR001611 GO:0005515
Tsu06g00951 957 Pfam Leucine rich repeat 508 563 IPR001611 GO:0005515
Tsu06g00951 957 Pfam Leucine rich repeat 107 166 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00951 Tsu-Chr6 8623483 8626947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00951 21 855 Receptor kinase-like Gene Family AT4G08850 40.300 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu06g00951 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00951 - - gmx:100814345 1438.71