Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00949 ATGAAATTGAGTTGCAATGGGTGTCGCGTACTTCGCAAAGGATGTAGTCAAGACTGCATCATAAAGCCCTGCCTTGAGTGGATTAGTTCCCCTGAATCACAAGGCAACGCCACCCTTTTTCTTGCCAAATTCTATGGTCGAACTGGCTTGCTCAACCTCCTTGCTAATGCTACCGATCAAAATCCTCCAGCTGTGTTCAAATCATTGTTGTATGAGGCTTCAGGTAGATTGGTGAATCCTACATATGGGGCATTAGGTTTATTTTGGACAGGACAATGGAGCCAATGTGAAGCTGCAGTCGAAGCTATGCTAACTGGATCAAATATTAATGATGTTACGGTTGTTGATGGGCAAACATTATCATATACACCCATTGCTGAAAATCGTATTATACCAAAAACCTATGATATACGCCACGTTGCAAGATGTACCAACGTAGACATAAAAGAGAAAACTCAATTCAAGAGAGTTGGGTCGACTTCCAAGCCCAAGTCACGAGTCGGTTTAGTAGACAAAGCTACACTTTTTAGATCGGTTTTGGAGAGTTGCAACGTGGAATCTGTTGAAGCTAATTCGTCAATGATTGAGACAAAGCCAAATGAAGTTGCTGAAACTCAAGTGAACTTGGAACTCACACTTGGCTTTAATTGCCAATCAAATAAAGGcaagaaaacaaataataattaa 687 0.4032 MKLSCNGCRVLRKGCSQDCIIKPCLEWISSPESQGNATLFLAKFYGRTGLLNLLANATDQNPPAVFKSLLYEASGRLVNPTYGALGLFWTGQWSQCEAAVEAMLTGSNINDVTVVDGQTLSYTPIAENRIIPKTYDIRHVARCTNVDIKEKTQFKRVGSTSKPKSRVGLVDKATLFRSVLESCNVESVEANSSMIETKPNEVAETQVNLELTLGFNCQSNKGKKTNNN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00949 228 PANTHER LOB DOMAIN PROTEIN 1 226 - -
Tsu06g00949 228 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Tsu06g00949 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 226 - -
Tsu06g00949 228 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00949 Tsu-Chr6 8600448 8601663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00949 1 142 AS2 family AT1G68510 57.432 8.35e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu06g00949 LOB 9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00949 - - mtr:MTR_1g110840 332.413