Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00923 ATGAATACTTTTTCTCATGTTCCCCCTGGTTTTAGGTTCCATCCAACAGATGAGGAACTTGTTGATTATTATCTTAGGAAGAAAATTGCTTCAAGAAGGATTGACCTTGATGTCATAAAAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTCAAGAGCTATGCAGAATAGGAACAGAAGAACAAAATGAATGGTACTTTTTTAGTCATAAAGATAAGAAATATCCAACTGGGACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAAGCAATATATAGTAAGCATGATCTTATAGGAATGAGGAAAACCTTAGTGTTTTATAAAGGTAGAGCTCCAAATGGACAAAAATCAGATTGGATAATGCATGAGTATAGGCTTGAAACAGATGAAAATGGCACACCACAGGAAGAAGGATGGGTTGTATGTAGAGTCTTCAAAAAGAGAGTAACAACAACTATGCGCAAAATGAATGAGCATGACTCTCCTTGTTGGTATGATGACCAAGTTTCTTTCATGCAAGACATGGACTCACCAAATCAAACCTCtcaacaaaatttgatttacCAACAACTTCCATATCCATGCAAAAAAGAGCTAGATAATTTACCATACCAAAACTTACCTCGTGAACATTTTCTTAATCTACCACTTTTAGAGAGTCCAAAACTTCTTCAATCATCTTCAAACATAACCTCTAACCCAATGGTAACAACAACATATGGTACTATAGATCATGCAAATTCTATGCTTCCTTCATCATCAATGCTACTACAAGAAGaacaaatcctaaaccctaATCAACAAAACTTTCATGCTATGTATGGAAACAACTCCACTATTGAACAAGGTGTTGTTGATGAACAAGTAACTGATTGGAGAGTTCTTGATAAGTTTGTTGCTTCACAACTTAGTCAAGATGCATCTAAAGACAATAATAACACAAGCAACATTTTTCATGGCAATGCTCAATTGAGAAATTTGGAGATACAAGAAATGGTGCCTCATGAAAATGCTTCAACATCAAACTCAAGTTGTCCAATTGATTTGTGGAAATAG 1083 0.3435 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTTMRKMNEHDSPCWYDDQVSFMQDMDSPNQTSQQNLIYQQLPYPCKKELDNLPYQNLPREHFLNLPLLESPKLLQSSSNITSNPMVTTTYGTIDHANSMLPSSSMLLQEEQILNPNQQNFHAMYGNNSTIEQGVVDEQVTDWRVLDKFVASQLSQDASKDNNNTSNIFHGNAQLRNLEIQEMVPHENASTSNSSCPIDLWK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00923 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 342 - -
Tsu06g00923 360 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Tsu06g00923 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 342 - -
Tsu06g00923 360 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Tsu06g00923 360 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Tsu06g00923 360 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00923 Tsu-Chr6 8307870 8310980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00923 1 360 NAC Transcription Factor Family AT1G12260 57.297 2.98e-135 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu06g00923 NAM 5.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00923 - - gmx:100815845 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00923 06 8307870 8310980 Tsu06g00923 06 8307870 8310980 ECH