Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00917 atggaggccTTTTCTTCAAAGATCCTTCTAATAATTTTTGCCTTTAGTTTTATCACACATTCTATCCAAGCAAATGAAGGACCATACCAACAATCAAACACATTATTCATTAGAAATTCTTGTAGTTCAACAACTTATCCAAGACTATGCTACACCTCCCTAGTGAAGCATGCCGATTTTATTCAAACAAATCAGGTACTTTTAACGGGCACGGCCTTGAACGTGACTCTTGCATCGGCAAAATCAACCTCGGCTATGATGTCATCTCTCGCTAAAAGCCAAGGGCTAAAGCCAAAAGAGGCTGCAGCTATGAAGGATTGTGTTGAAGTGTTAAGTGACTCTGTTGATGAACTCCGAAGGTCTATCGATGAGATTAGTCATCTTAGTACTTCAAATTTTGAGCTAACGATGAGCGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATCAAAGTACTTGTACGGACGGATTTCAAGAGCTTAATGCGAATGGAGAAATTAAGACAATTGTGAGAGGGAGAATCGTTCAAGTAGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCCACTTCACATCCTTAA 594 0.3855 MEAFSSKILLIIFAFSFITHSIQANEGPYQQSNTLFIRNSCSSTTYPRLCYTSLVKHADFIQTNQVLLTGTALNVTLASAKSTSAMMSSLAKSQGLKPKEAAAMKDCVEVLSDSVDELRRSIDEISHLSTSNFELTMSDVQTWVSAALTDQSTCTDGFQELNANGEIKTIVRGRIVQVAQLTSNALALINKLATSHP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00917 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Tsu06g00917 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Tsu06g00917 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Tsu06g00917 197 CDD PMEI-like_3 40 194 - -
Tsu06g00917 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 194 - -
Tsu06g00917 197 PANTHER 21 KDA PROTEIN-LIKE 4 194 - -
Tsu06g00917 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Tsu06g00917 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00917 Tsu-Chr6 8235763 8237344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00917 37 192 Carbohydrate Esterase AT3G14310 33.125 3.62e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00917 - - gmx:100305537 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00917 06 8235763 8237344 Tsu06g00917 06 8235763 8237344 ECH