Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00916 ATGGAAGCCTTTTCTTCAAAGATCTTTCTAATAGTTTTTGTCTTTAGTTTCATTACATACTCTATCCAAGCAAATGAAAGCCAACAATCCAACACATTATTCATTAGAAATTCTTGTAGTTCAACAACTTATCCAAAATTATGCTATACTTCCCTAGTGAAACAAGCCGATTCCATTCAAACAAATCGCGTACTTTTAGCAAGCAAGGCCTTGAACGTGACTCTTGCATCAGCGAAATCAACCTCGGCTATGATGTCAACTCTCGCAAAAAGCCATGGACTGAATCCGAGTGAGGTTGCAGCTATGAAGGATTGCGTCGAAGTGGTAAGTGAATCCGTCAATGAACTCCGAAGGTCTATCGATGAGATTAGTCGTCTTAGCACTTCAAATTTTGAGCTAACGATGAGTGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATGAGAACACTTGTACCGACGGATTCCAAGAGATTAATGCAACAGGAAATATTAAGACAATAGTAAGAGGGAAAATTGTGCAATTAGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCTAATTCACATCCTTAA 588 0.3844 MEAFSSKIFLIVFVFSFITYSIQANESQQSNTLFIRNSCSSTTYPKLCYTSLVKQADSIQTNRVLLASKALNVTLASAKSTSAMMSTLAKSHGLNPSEVAAMKDCVEVVSESVNELRRSIDEISRLSTSNFELTMSDVQTWVSAALTDENTCTDGFQEINATGNIKTIVRGKIVQLAQLTSNALALINKLANSHP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00916 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 192 - -
Tsu06g00916 195 CDD PMEI-like_3 38 192 - -
Tsu06g00916 195 Pfam Plant invertase/pectin methylesterase inhibitor 34 186 IPR006501 GO:0004857
Tsu06g00916 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 192 IPR035513 -
Tsu06g00916 195 PANTHER 21 KDA PROTEIN-LIKE 9 192 - -
Tsu06g00916 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 190 IPR035513 -
Tsu06g00916 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 190 IPR006501 GO:0004857
Tsu06g00916 195 SMART PMEI_2 30 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00916 Tsu-Chr6 8227975 8228691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00916 25 190 Carbohydrate Esterase AT1G53830 29.714 2.91e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00916 - - gmx:100305537 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00916 06 8227975 8228691 Tsu06g00916 06 8227975 8228691 ECH