Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00915 ATGCTTTTAACGGGCGCGTCCCTAAATGTGACTCTTGCAGCGGTGAAATCAACTTCAGCTTTGATATCAACACTCGCTAAAAGCCATGGGTTGAAGCCAAGAGAAGTTGCGGCTATGAAGGATTGCGTTGAAGTGCTAAGTGATTCTTTGGATGAACTTCGAAGGTCTATCAACGAGATGAGTCATCTTAGGGCTTCCAATTTTGAGCTAACAATAAGCGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATCAGACCACTTGTACCGACGGATTCCAAGAGATTAATGCAACAGGAAATATTAAGACAATGGTGAGAAGGATAATTGTACAAGTAGCTCAAATGACAAGCAATTCTTTGGCTTTGATAAATAAACTTGCCACTTCACATTATTAA 399 0.4085 MLLTGASLNVTLAAVKSTSALISTLAKSHGLKPREVAAMKDCVEVLSDSLDELRRSINEMSHLRASNFELTISDVQTWVSAALTDQTTCTDGFQEINATGNIKTMVRRIIVQVAQMTSNSLALINKLATSHY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00915 132 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 129 IPR035513 -
Tsu06g00915 132 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 127 IPR006501 GO:0004857
Tsu06g00915 132 Pfam Plant invertase/pectin methylesterase inhibitor 3 123 IPR006501 GO:0004857
Tsu06g00915 132 CDD PMEI-like_3 3 129 - -
Tsu06g00915 132 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 127 IPR035513 -
Tsu06g00915 132 PANTHER 21 KDA PROTEIN-LIKE 2 129 - -
Tsu06g00915 132 SMART PMEI_2 2 123 IPR006501 GO:0004857
Tsu06g00915 132 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00915 Tsu-Chr6 8222576 8223428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00915 6 127 Carbohydrate Esterase AT1G53830 36.290 1.38e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00915 - - gmx:100802601 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00915 06 8222576 8223428 Tsu06g00915 06 8222576 8223428 ECH