Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00914 ATGCTACGAAATCACCATGTGCCACGTTCAATCCCTTCATCCCTAAAATCAGCAAGAAGTGCATCAAGTACATTGAAAAGACTAAGTTCAAAGAAGCTAACACATGCCGAAACATTGGTCATTGCCGATTGTAGCGAAAATGTTGAAGATACGGTGGATTCACTCGAAGATTCGGCCGATGGGCTTGTGCATTTGAATGGTACTACAACTAGTGATGAAAGGTTTCAATGGGATACTATAAAGACATGGATGAGTTCAGCTATTACTGATGAGGGAACATGTACGGATGAGTTTGATGAAATGGAAGTTAGGTCTTCAATAAAGAAAATGATCAAAACAAGTGTTGGTAATCTTCTTTACATGACTAGCAATGCTTTGGCTTTTGTAAACAGGCTTTCCTACTAG 405 0.3926 MLRNHHVPRSIPSSLKSARSASSTLKRLSSKKLTHAETLVIADCSENVEDTVDSLEDSADGLVHLNGTTTSDERFQWDTIKTWMSSAITDEGTCTDEFDEMEVRSSIKKMIKTSVGNLLYMTSNALAFVNRLSY 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00914 134 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 132 - -
Tsu06g00914 134 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 132 IPR006501 GO:0004857
Tsu06g00914 134 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 132 IPR035513 -
Tsu06g00914 134 Gene3D Invertase/pectin methylesterase inhibitor family protein 9 133 IPR035513 -
Tsu06g00914 134 CDD PMEI-like_3 10 133 - -
Tsu06g00914 134 Pfam Plant invertase/pectin methylesterase inhibitor 14 127 IPR006501 GO:0004857
Tsu06g00914 134 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 132 - -
Tsu06g00914 134 SMART PMEI_2 3 128 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00914 Tsu-Chr6 8205843 8206869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00914 24 133 Carbohydrate Esterase AT3G14310 32.143 2.43e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00914 - - mtr:MTR_4g035855 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00914 06 8205843 8206869 Tsu06g00914 06 8205843 8206869 ECH